Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2115 ATGGACCTTTCTTACAATAATTTCACTGGAGATCTGCCAAGTTCATTTGGTTCCTTGATGAACCTTGAGAAATTGTTCCTGCAGAATAACAGATTTACTGGATCAGTCACGTACCTGGGGGACCTTCCACTCATTTATTTGAACATTCAAGAAAACCTGTTTAGTGGCATTCTTCCACAACACTTTCAGTCCATACCAAACTTATGGATTGGTAGCAATATGTTCCATGCAGTGGACGGCACTCCTCCTTGGGGATTTCCTTTGGACGCTGTACCAATTGAACAGAATACTAGTCGCCCACCCATAACCCAAGCAAATGCCATCGAGAATTATGCTCCTTCTAAAGTAAGAAAAAACAAGGAGAAAACAATGGGCTATGGAGGAATAGCTTTTATTGTTGGTGGGGGAACATTATTGGTAACAGGATTGGCGCTCTTCATTGTGATCCGTGTGAATAAACTTCACACCCAAAAATTGAAGAACTTAGTCTTCGAAAGCAACTACCATAGTCCATTTTCTACTCATTCATTTCCTTCACATCCATTTCCTTCTCATCCATTTCCTTCTCGTCCAATCAGTGCAGCCAAAGAGGTCTCTTATGCGGCACAAGATGATATGCTGCAAATCCCACCTTTCAATGCTGCATCCCTTTTGAATCCAAGGCGGTTACCTTCCCAGAACCATAAAAGAAAGGGGGAAACGTCTAGAAGAAGTTTTTCTGAAAGAGACAAATTCACTGGAAGGACGAAGGTTTACACAGTAGCTGAGGTTCAGTTGGTCACTAACAGCTTCAGCGAAGACAACCTTCTGGGAGTAGGCTCTCTTGGCCCTGTTTATACAGCTGAGTTACCAGATAACAAGGTTTTGGCTGTGAAGAACATCCAAATGGCAGGCTTATCTTTCAGTGAAGAGGAAAAGTTCTTAGATGTGGTTTGTACAGCTTCCCGTCTGAAGCACCCCAATATTGTTGCACTTAAAGGTTACTGTTTGGAGCACGGCCAACATCTTCTTGTCTATGATTATGTCAGAAATTTAACCCTAGACAATGCTCTACACAGTGCAGCATACAAACCTTTATCCTGGGGCCTCCGTCTCCGAATTTCTCTAGGTGTTGCACAAGCTCTGGACTATCTGCACTCCACATTCTCCCCTCCTGTCGCCCATGGCAACTTGAAAGCTGCCAATATTTTACTAGACGAAAATCTGATTCCTCGTGTTTCTGACTGTGGCTTGGCTATTTTAAAACCACTGACCAACACTACAGCTAAAATTCGGGCTTCTGAGATTTCTATCAGAGATACTGGGTACAATTCACCTGACCATGGCCAACCGGGAATTAGCAACACAAAGAGTGATGTCTTTGCCTTTGGGGTGTTGCTTTTGGAGCTGTTATCAGGAAGAAAACCATTCGAAAGTTTTATGCCAAAGGAAGAGCAATATCTAGCAAATTGGGCTTCATCGAGGCTTCATGATAGCGAGAGTTTGGAGCAAATGGTGGATCCGGCAATTAAAAGAACATTTTCATCAAAGGCTCTTTCTCGTTATGCTGATATCATCTCATTATGTACTCAGCCTGTAAAGGAATTCCGGCCTCCAATGTCTGAAATAGTGGACTCTCTTGTATCTTTTATGCAAAAGCTCAGCATGTCAAAGAGCGCTGGTGGTGTAGTAGATGGCACCGAATTTGATCCACTTGAGAGATCTTTTCGTACAACCACATCTCGCTTTATGGCATCACCATCAATGAGCTATGTATCAGTATGA 1764 0.4286 MDLSYNNFTGDLPSSFGSLMNLEKLFLQNNRFTGSVTYLGDLPLIYLNIQENLFSGILPQHFQSIPNLWIGSNMFHAVDGTPPWGFPLDAVPIEQNTSRPPITQANAIENYAPSKVRKNKEKTMGYGGIAFIVGGGTLLVTGLALFIVIRVNKLHTQKLKNLVFESNYHSPFSTHSFPSHPFPSHPFPSRPISAAKEVSYAAQDDMLQIPPFNAASLLNPRRLPSQNHKRKGETSRRSFSERDKFTGRTKVYTVAEVQLVTNSFSEDNLLGVGSLGPVYTAELPDNKVLAVKNIQMAGLSFSEEEKFLDVVCTASRLKHPNIVALKGYCLEHGQHLLVYDYVRNLTLDNALHSAAYKPLSWGLRLRISLGVAQALDYLHSTFSPPVAHGNLKAANILLDENLIPRVSDCGLAILKPLTNTTAKIRASEISIRDTGYNSPDHGQPGISNTKSDVFAFGVLLLELLSGRKPFESFMPKEEQYLANWASSRLHDSESLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRPPMSEIVDSLVSFMQKLSMSKSAGGVVDGTEFDPLERSFRTTTSRFMASPSMSYVSV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2115 587 Gene3D Ribonuclease Inhibitor 1 113 IPR032675 -
Psa6g2115 587 PANTHER OS01G0253100 PROTEIN 3 577 IPR045271 GO:0004714|GO:0006468
Psa6g2115 587 MobiDBLite consensus disorder prediction 226 241 - -
Psa6g2115 587 MobiDBLite consensus disorder prediction 220 241 - -
Psa6g2115 587 Pfam Protein tyrosine and serine/threonine kinase 268 540 IPR001245 GO:0004672|GO:0006468
Psa6g2115 587 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 3 577 - -
Psa6g2115 587 SUPERFAMILY L domain-like 2 68 - -
Psa6g2115 587 ProSiteProfiles Protein kinase domain profile. 264 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2115 587 SUPERFAMILY Protein kinase-like (PK-like) 240 540 IPR011009 -
Psa6g2115 587 Gene3D Transferase(Phosphotransferase) domain 1 343 556 - -
Psa6g2115 587 Gene3D Phosphorylase Kinase; domain 1 225 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2115 Psa-Chr6 145880174 145884081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2115 1 586 Strubbelig Receptor Gene Family AT5G06820 52.470 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Psa6g2115 PK_Tyr_Ser-Thr 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2115 - - cam:101498175 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2115 6 145880174 145884081 Psa6g2115 6 145880174 145884081 ECH
Psa3g1626 3 146178923 146183976 Psa6g2115 6 145880174 145884081 PCT