Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2101 ATGTTGGGCTTGCCAAATTTGTTGGCCTATCATTTGAAGTTAGATACAAACCAAGGACGGAAAATAGGGCAGCAATGCTTATCCAGATGCTATGATGAGGAGAATTTAACACCATCATTTCTTATCCATGTGGCCGAAAGGCAGAAATTGTTGGAGGAGATAGCCAAGTCCATATATTCAAAGATTGATAACCGAATAGGAAACTATGAGGTACAAGGAGAACTGCCTAGAGAATTGGAGATAAATGAGGCTGCTGATGCGTATCCAGATAAGATTGTGGGTTCTAGAACTGTTTTGCAAGGCGATACTGAAGTGCAGCAGAGCTTGGTCCAATGGAAGAACCGGTCCATTGATGATGTGACATGGGAAGACAATGAACTTCTAATTGGGCAATTTCCTGAATTCTGCCTTGAGGACAAGGCTGTTTCTAAGGAGGTGGGAGTTGATAGAAACAGGGTGCAGAATGTGGGCTTTGATTATGGGCCTAAGCCAAGGGTGTGGAAGGTTATAAGAGGAAAAAGCAAAGGAAAGGGGAATGATGACGTGGTGATTTGGGCAGAGGCATACGTGCTTCTTAGGGCTGGTATTCCACTACCAGTTTGTTGCATCTTTTCTCTTTCCCTAATACATACAATGAGATGTGCAGATTTTATTGTTAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGTAGTGAGGTCAAGACTTTGGTGTCTGGTGACCGTGTCGCGATTGAGCCTGGGATCAGTTGTTGGCGTTGCAACCATTGTAAACTTGGTCGATATAATCTATGCCCTGATATGAAGTTTTTTGCTACTCCACCGGTTCATGGTTCCCTTGCTAATCAGATAGTTCATCCAGCAGACCTATGTTTTAAACTACCAGACAATGTGAGCTTGGAGGAAGGGGCAATGTGTGAACCCTTAAGTGTCGGCGTTCATGCTTGTAGGCGAGCTAATATCGGACCGGAAACAAATGTGTTGATTATGGGAGCAGGACCTATCGGACTTGTTACAATGCTTTCGGCTCGTGCTTTCGGGGCACCTAGGATTATCGTCGTGGATGTGGATGACCATCGTTTATCTGTTGCAAAAAGTCTTGGCGCAGACGATATTGTTAAAGTTTCAACAAACATTCAGGATGTAGGTGAAGAAGTTAAGCAAATACATAATGTTATGGGAGCTGGTATAGATGTTACCTTTGATTGTGCTGGTTTTAACAAAACCATGACTACCGCATTGACTGCTACTCAACCAGGAGGCAAAGTTTGTCTCGTCGGAATGGGTCATTCTGAAATGACCGTGCCACTCACACCAGCTGCTGCAAGGGAAGTTGATGTTGTTGGCATTTTCCGCTATAAGAATACATGGCCTCTTTGCCTCGAATTTCTAAGGAGTGGCAAAATTGATGTAAAACCACTTATAACTCATAGGTTTGGATTCTCGCAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGCGGTAATGCTATTAAGGTCATGTTCAATCTTTAG 1539 0.434 MLGLPNLLAYHLKLDTNQGRKIGQQCLSRCYDEENLTPSFLIHVAERQKLLEEIAKSIYSKIDNRIGNYEVQGELPRELEINEAADAYPDKIVGSRTVLQGDTEVQQSLVQWKNRSIDDVTWEDNELLIGQFPEFCLEDKAVSKEVGVDRNRVQNVGFDYGPKPRVWKVIRGKSKGKGNDDVVIWAEAYVLLRAGIPLPVCCIFSLSLIHTMRCADFIVKEPMVIGHECAGIIEEVGSEVKTLVSGDRVAIEPGISCWRCNHCKLGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPRIIVVDVDDHRLSVAKSLGADDIVKVSTNIQDVGEEVKQIHNVMGAGIDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2101 512 Gene3D - 88 136 - -
Psa6g2101 512 Gene3D - 206 498 - -
Psa6g2101 512 Gene3D - 317 457 - -
Psa6g2101 512 PANTHER SORBITOL DEHYDROGENASE 206 512 - -
Psa6g2101 512 CDD sorbitol_DH 213 511 IPR045306 GO:0016616
Psa6g2101 512 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 226 240 IPR002328 GO:0008270|GO:0016491
Psa6g2101 512 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 303 476 IPR036291 -
Psa6g2101 512 SUPERFAMILY GroES-like 213 338 IPR011032 -
Psa6g2101 512 Pfam Alcohol dehydrogenase GroES-like domain 209 300 IPR013154 -
Psa6g2101 512 SUPERFAMILY Chromo domain-like 76 135 IPR016197 -
Psa6g2101 512 SMART PKS_ER_names_mod 178 510 IPR020843 GO:0016491
Psa6g2101 512 PANTHER L-IDONATE 5-DEHYDROGENASE 206 512 - -
Psa6g2101 512 Pfam Zinc-binding dehydrogenase 340 470 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2101 Psa-Chr6 144536523 144540169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2101 222 445 Monolignol Biosynthesis Gene Families AT4G37980 27.039 9.93e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2101 K00008 - gmx:100820630 576.63