Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2092 CAACCAATTTGCACTACAGAGAAGAAAGAATATTTGTTGTTGTCATTGAGGATTTACTAGCAAAAGGAATCAAAAATGCTAAAAATACAATTCTATCTAGATGTTCTGCTGGAGAATCGACTTCTATTTTACAATATGATCGCTTTAGAACTTTACTTCCTGCAGCAGCTGAAGTTAAATGCGTCTCAGGTGCCGGTTATTTTATCAATGTAAAAGCGGTCTCTGGAGCACAACACATTGAACAATTCTACAACCAAGTCGTTCAAACACATGCCTCAACAAAGAATTTGCCTTTGTCTTGCACATCAAGACTTTCGCCTGTGCTGTGTTGTTTTTCGCAAAATGAGGTCGCACAAATCAAGACACCAATCTTCTTTGTAATTGCAGCTTATGACTCATGGAAGATTAAGAATATTTTGGCACCCGGTGTTGTTGATCTACATGGCACTTGGCCTGCTGAGAAATTCCGCAAGGAGTCTGGAACTGAGCCTGACATTGATCTTGCTACAACCACTGATCGGATGGCTGTTAAGAAGGCAGTACAAAGTGGTAACGTTGAAGATGCAATCGAGAAAGTCAATGACTTAAATCCTGGGATGCTGGATGCACAAGCCACCCAAAACCGAGTACAAAACCAGAGCTGTGATCAAAATCGGAACCGCTTTTGA 668 0.4087 TNLHYREERIFVVVIEDLLAKGIKNAKNTILSRCSAGESTSILQYDRFRTLLPAAAEVKCVSGAGYFINVKAVSGAQHIEQFYNQVVQTHASTKNLPLSCTSRLSPVLCCFSQNEVAQIKTPIFFVIAAYDSWKIKNILAPGVVDLHGTWPAEKFRKESGTEPDIDLATTTDRMAVKKAVQSGNVEDAIEKVNDLNPGMLDAQATQNRVQNQSCDQNRNRF* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2092 221 Pfam Pectinacetylesterase 1 169 IPR004963 GO:0016787
Psa6g2092 221 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 169 197 IPR006595 -
Psa6g2092 221 PANTHER NOTUM-RELATED 1 166 IPR004963 GO:0016787
Psa6g2092 221 PANTHER PECTIN ACETYLESTERASE 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2092 Psa-Chr6 144076927 144078232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2092 1 150 Carbohydrate Esterase AT4G19420 53.333 7.91e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2092 K19882 - zju:107430580 224.172