Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2082 ATGGAAGATTATGAGGTTGTAGAGAAACTTGGAAGAGGAGCTTTAGGTGCAACTTTTCTTGTTGTTCATAAAACTGATAGAAAGAGGTATGTGTTGAAGAAGATTCGCTTGTGTAAGCACACAGAGAAGTCCAAATTGACAGCGTACCAAGAGATGGACCTGATAGCAAACCTAAATTACCCTTATATTGTGGAGTACAAAGATGCCTGGGTGGAGAAGGAGGACTATATATACATTATAAGCGGCTTTTGCGAAGGAGGTGACATGGCTGAGAATATAAAGAAATCTCGAGGATCTTTTTTTCCAGAAGAGAAAGTCTGCAAATGGATGACTCAATTGTTGCTAGCTGTGGACTACTTACACTCTAACCGTGTGCTCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGAAAACAACATTCGTCTAGGTGACTTTGGTCTTGCAAAGCTACTTGACACAGACGATCCTGCTTCTTCGGTTGTTGGAACTCTAAATTACATGTGTCCTGAGATCTTTGCTGATATGCCGTATGGTTATAAATCTGACATATGGTCGCTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACCAGCATTTCGTGCTCCGGACAGGGCTGGACTTATCAATAAAATAAATAGATCCACTATTTCTCCATTGCCAATTGTTTACTCTTCCACACTGAAACAGCTTATCAAGAGCATGCTGAGGAAAAACCCTGAACACAGACCAACAGCGGCTGATTTGTTGAGACATCCTCATTTACAACCTTTTGTTCTCCGCTCTCGTAACACGCCATCTGTTTTTCTTCCGGTACATCTCATAAGTTGTAACTCACCGAAAAAATCTTACAAATCTAGCGGTGGCAAGGACAATAGGGACAAAGAAGAAGCGTTTGTAAACCGTTTGGATCGAGTTTATCCAATTGAGGGAGATGGAGATGTACAGACAAGAAACCGCAAATTAGCAGTGTCAACAAGCACAGAAGACAACCTTGAGACTAAAATGGTGGATCCTACCAGCTACACGTTGGAATTTTCTACTAGTATTAGTGGCTCAAAGGACGAGTCAACAACATCTGAATCAACCGTTTGCAGCGTGTGCAAGGAAGCAGATTTTAAAAGTAGAGCTGTAAGAGACATGGCTGATACAGAGGTCACTTCAAAGAGTACACTAGATTCTATGCATGAAAAACAAGCATTTGCTACTCAACAATTTCCGAAGTCGTATGCAGTTGACATAAATGCAGCGACTAAAAAAGTTGAATATAGTTTTTCTAGTAAAGTTTTCGATAAAGATGAAGTGCATAAGGAAGCTTCAAAACCTGGGGACTCTAGTAAAACAATAATCTCCAGTGACGACAGCAATGGAAATGATGAAGATGCGGTCACATCACGATGTATTCCAGATAAATACAAATTTTCCAATAAAGGTTTTGATGAGGAAGAAGTACAGAAAGAAAAAGCAAAACCTGAGGACTTCATCAAATCGATAATGTCCAGGGAATATAGAACTGGGAATGATATAGATGGGTGCATTGATGAGGTTACTTCGGAAAGTACACTAGAGTTTTTGCTTGTAGAACAATTTATCACCGAGCATTTTCAGAATCCCGATGCATTTGACATAAATGCAGTAACAACAGAAGTTGAAGGTAGTTTTTCCGAAGGTTGTTTTGATACTCTTTCCGACGGTGGCTTTAATACTTTTTCCGAAGCACTTACAGAAGATGCCAAACCCGAGGAATCTAGTAAATCAATCATTTACAGCAAAGACTGCAATCAAAATGATAAACAGTCTATTGATGATATCACTTCGAAGAGCACACTGGATTCGGTGAATGAAGAACAGGAAATAGCCGCTGAGAGTTTTCCAAAATCGAATACGTATGACAAAAATCCGATGTCTACAAAAACTGACGGCACACTTTCCCGCCAATGTTTTGATAAAGATCAAGCACAGAGAGAAGATGCCCTACCCGATGACTCAAGTAAATCAATCATTGGTAGCAAAGACATCAATGCAAATGATAAAGAATGGTCCACCGATGATATCACTTCAAAGAGAACAATGGATTCTTTACACGAAGAACAAGAATTTGCCGCTGAAAATTTTCAGAAGTCAAATATGATTGACATAAATCCAGTAACTTCAAAAGTTGATGATATAGGTGAACCACAAAGAGAAGATGCCAAACCTGAGGACTTCAGTAAATCAATTATTTACAACAATGACAATGACAATGACAAAGAGGGGTCTTGTGATGAGGTCACATCAACGAGCACACTCGGTTCCGTGCATGAAGAGCGACGGCTTTCTGTTGAACACTTTCAGAAGCCAGATACAAATGACATAAATCCAGTGACTTCAAATGTTGATGATACTCTTCCCATTAAAGAGTTTGATAAAGCGGAACCCCAAAGAGAAGATGTCAAATCTGAGGACTCAATTAAATCAATCATTTACAACAATGACAATGACAAAGAGGGGCCTTGTGATGATGTCACATCAACGAGCACACTCAGTTCTGTACATGAAGAGCGACGACTTTCTATTGAACACTTTCAGAAGCTAGATACTAATGATATAAATCCAGTGGCTTCAAAAGTTGATGATACTCTTTCCAGTAAAGAGTTTGATATAGCTCAAACACGAAGAGAAGGTGCAAAACCTGAGGACTCAAGTAAATCATTCATTTACAACAATGGCAATGACAAAGAGGGGTCTACTGATGAGGTCACATCAACGAGCACACTCGATTCTGTACATGAAGAGCGACAACTTTCTGTTGGACACTTCCAGAAGCCAGATACTAATGACATAAATACAATGACTTCAAAAGGTGATGATACTCTTTCCAGTGAAGAGTTTGATAAAGCTGAACCACAAAAACAAGATGCCAAATCTGAGGACTCAAGTAAATCAATCATTTACAACAATGACAATGACAAAGAGGGGTTTACCGATGAGGTCACATCAACGAGCACACTCGATTCTGTGCATGAAGAGCGACGGCTTTCTGTTGATCACTTTCAGAAGTCAGATACAAATGACATAAATGCAGTGACTGCTAAAGTTGATGGTACTTTTTCCAATAAAGGTTTTGATAAATTTGAAGAAAGCAGTGACAATGATAAAATCAGTTTCATCGAAGAGGAAATGGCATCAACAAATTTGCATTCTGTTAGGGTTGAACAAGACCCTGATACTGTAAGCTGCTTGAAGGAAAGTGAAAAATCACAATCATCCACAGAAGACTCACACACGAACATTCTGACTTCTGAGAGCAATGGTACACTTCCAGCTAAGCATGAGGGCAGAGAAAACACCCACATAATCAGTCGCTCCACACACAATGACGATAAAAATGCCACTGTGATTGATAAAATCCCAAATGAAATTTCCTTTAGTACAAATATTCCAGTAGTCGGTGATAAAACGAAGAGGGTGTTAAAAAACTCCGGCCAACAAAGAGCTGATGCTTTGGAATCTCTACTTGAGTTATGTGCTCATTTACTTAAGCAAGGAAAGCTCGAAGAGCTTGCTGCGGTGCTAAGACCATTTGGAGAAGACACAGTTTCATCCAGAGAAACAGCTATATGGCTGACAAAAAGCCTCATGTCATCGCAAAAATTTAATCCGGAAACCTAG 3660 0.3951 MEDYEVVEKLGRGALGATFLVVHKTDRKRYVLKKIRLCKHTEKSKLTAYQEMDLIANLNYPYIVEYKDAWVEKEDYIYIISGFCEGGDMAENIKKSRGSFFPEEKVCKWMTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGDFGLAKLLDTDDPASSVVGTLNYMCPEIFADMPYGYKSDIWSLGCCMFEIVAHQPAFRAPDRAGLINKINRSTISPLPIVYSSTLKQLIKSMLRKNPEHRPTAADLLRHPHLQPFVLRSRNTPSVFLPVHLISCNSPKKSYKSSGGKDNRDKEEAFVNRLDRVYPIEGDGDVQTRNRKLAVSTSTEDNLETKMVDPTSYTLEFSTSISGSKDESTTSESTVCSVCKEADFKSRAVRDMADTEVTSKSTLDSMHEKQAFATQQFPKSYAVDINAATKKVEYSFSSKVFDKDEVHKEASKPGDSSKTIISSDDSNGNDEDAVTSRCIPDKYKFSNKGFDEEEVQKEKAKPEDFIKSIMSREYRTGNDIDGCIDEVTSESTLEFLLVEQFITEHFQNPDAFDINAVTTEVEGSFSEGCFDTLSDGGFNTFSEALTEDAKPEESSKSIIYSKDCNQNDKQSIDDITSKSTLDSVNEEQEIAAESFPKSNTYDKNPMSTKTDGTLSRQCFDKDQAQREDALPDDSSKSIIGSKDINANDKEWSTDDITSKRTMDSLHEEQEFAAENFQKSNMIDINPVTSKVDDIGEPQREDAKPEDFSKSIIYNNDNDNDKEGSCDEVTSTSTLGSVHEERRLSVEHFQKPDTNDINPVTSNVDDTLPIKEFDKAEPQREDVKSEDSIKSIIYNNDNDKEGPCDDVTSTSTLSSVHEERRLSIEHFQKLDTNDINPVASKVDDTLSSKEFDIAQTRREGAKPEDSSKSFIYNNGNDKEGSTDEVTSTSTLDSVHEERQLSVGHFQKPDTNDINTMTSKGDDTLSSEEFDKAEPQKQDAKSEDSSKSIIYNNDNDKEGFTDEVTSTSTLDSVHEERRLSVDHFQKSDTNDINAVTAKVDGTFSNKGFDKFEESSDNDKISFIEEEMASTNLHSVRVEQDPDTVSCLKESEKSQSSTEDSHTNILTSESNGTLPAKHEGRENTHIISRSTHNDDKNATVIDKIPNEISFSTNIPVVGDKTKRVLKNSGQQRADALESLLELCAHLLKQGKLEELAAVLRPFGEDTVSSRETAIWLTKSLMSSQKFNPET* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2082 1219 MobiDBLite consensus disorder prediction 437 465 - -
Psa6g2082 1219 CDD STKc_Nek 3 258 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 1061 1201 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 543 638 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 865 942 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 1 471 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 477 552 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 710 786 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 629 722 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 943 1029 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 787 864 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 603 651 - -
Psa6g2082 1219 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2082 1219 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 1065 1110 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 447 465 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 1072 1086 - -
Psa6g2082 1219 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2082 1219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Psa6g2082 1219 MobiDBLite consensus disorder prediction 886 1001 - -
Psa6g2082 1219 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2082 1219 SUPERFAMILY Protein kinase-like (PK-like) 1 283 IPR011009 -
Psa6g2082 1219 Gene3D Transferase(Phosphotransferase) domain 1 86 299 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 720 769 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 935 953 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 787 864 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 543 638 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 471 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 865 942 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1061 1201 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 943 1029 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 629 722 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 710 786 - -
Psa6g2082 1219 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 477 552 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 808 843 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 725 739 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 603 690 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 1087 1103 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 954 974 - -
Psa6g2082 1219 MobiDBLite consensus disorder prediction 898 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2082 Psa-Chr6 142717517 142724710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2082 4 259 MAP Kinase Kinase Kinase AT3G13530 31.907 1.49e-33 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa6g2082 Pkinase 6.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2082 K08857 - gmx:100796658 970.689