Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2056 ATGGCCTTCAAGAACTTCTCCTATATACTTTCCATGATCTTGTTCTTTGTATCATTGTGTGTAGCAAATGGTGCTCCACCAGAAACCATTTGCAACTCTCTTGTAAACCCTACTTATTGTAAAACCATTATGGGTAATCAAAATGGAAACATCTATGACTATGGTCGCATTTCTATTCAAAAATCGTTATCACAATCGCGTAAGTTCATGAACTTATTGGATTCGTATCTTCAAGTTAGCTCGTCTTTGTCTCAATCCATGATTTGCGCTCTCGAAGATTGTCGATTCCTTGCAAGCCTAAGTTTTGAATACTTATCAAACACCTATGCCACAACAAATACATACAGTAATGTTCTTCCATCTTCTCAAGCACAAGATTTCGAAACGTTCCTTAGTGCAGTTTTGACTAACCAACAAACATGTTTGGATGGTCTAAACACTATATCTTCTTCTGATCAAAGAGTGAAGAACGATTTGTCGTTCACTCTCTGA 492 0.3699 MAFKNFSYILSMILFFVSLCVANGAPPETICNSLVNPTYCKTIMGNQNGNIYDYGRISIQKSLSQSRKFMNLLDSYLQVSSSLSQSMICALEDCRFLASLSFEYLSNTYATTNTYSNVLPSSQAQDFETFLSAVLTNQQTCLDGLNTISSSDQRVKNDLSFTL* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2056 163 CDD PMEI-like_3 29 152 - -
Psa6g2056 163 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 156 IPR035513 -
Psa6g2056 163 Pfam Plant invertase/pectin methylesterase inhibitor 28 152 IPR006501 GO:0004857
Psa6g2056 163 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 161 IPR035513 -
Psa6g2056 163 SMART PMEI_2 22 161 IPR006501 GO:0004857
Psa6g2056 163 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 9 162 - -
Psa6g2056 163 PANTHER PECTINESTERASE 9 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2056 14 163 Carbohydrate Esterase AT4G02330 42.857 6.08e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2056 K01051 - gmx:100786124 172.94