Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2041 ATGGGTAAGAACAAGAAAAAGAGAACTAGGGTTTCCGATGACGATGAAGAAATCGAATCCGATAACAACAACAACGATTCCAATCAGAAAGATAATTCCCTCTACCAGGTTCTTGGTGTGGACAGTACAGCGACTCAACAGGAAATAAAGAAGGCGTATCACAAATTGGCGTTGAGGCTTCATCCTGATAAGAACCCTGGCGACGAGGAAGCTAAAGCCAAGTTTCAGCAATTGCAAAGTGTTATCTCAATTCTTGGAGATGAACAAAAACGGGCAATGTATGATCAGACTGGTTCTGTTGAACACGCCGACCTTGCTGGAGATGTTGTTCAGAATCTTCACGAATATTTCAGAACAATGTACAAGAAGATCACTGAAGCTGATATTGAGGAGTTCGAAGCAAACTATAGAGGATCTGACTCTGAGAAAACTGATTTGATTAATCTCTACAAGGAATGCAAAGGAAATATGAACAGGTTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTCGACTCACACCGATTCAAGGATATTATTGATGAGGCCATAGCTTCTGGAGAACTAAAGGAAAAGAAAGCTTACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCTTTAAGAAGCAGGGCAAAAGCAAATAAGGATCCAAAAACGGATTTGTATGCTATCATATCAAAACGACAAAATGAGAGGAAAGGCCAGCTTGATTCTATGTTCTCGTCTTTAATTTCAAAGTATGGGGGAGAGCATGCGCCAGAACCAACTGAAGAGGAATTTGAAGCTACACGAAGAAAGATGGAAAGCCGAAGATCCTCAAAAAAGGCAAAGCGGAAATAA 855 0.4023 MGKNKKKRTRVSDDDEEIESDNNNNDSNQKDNSLYQVLGVDSTATQQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQSVISILGDEQKRAMYDQTGSVEHADLAGDVVQNLHEYFRTMYKKITEADIEEFEANYRGSDSEKTDLINLYKECKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAIASGELKEKKAYKKWAKKISETKPPTSPLRSRAKANKDPKTDLYAIISKRQNERKGQLDSMFSSLISKYGGEHAPEPTEEEFEATRRKMESRRSSKKAKRK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2041 284 MobiDBLite consensus disorder prediction 216 239 - -
Psa6g2041 284 CDD DnaJ 35 87 IPR001623 -
Psa6g2041 284 Gene3D DnaJ domain 17 123 IPR036869 -
Psa6g2041 284 Pfam DnaJ domain 34 95 IPR001623 -
Psa6g2041 284 MobiDBLite consensus disorder prediction 256 273 - -
Psa6g2041 284 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 284 - -
Psa6g2041 284 ProSiteProfiles dnaJ domain profile. 33 98 IPR001623 -
Psa6g2041 284 SMART dnaj_3 32 90 IPR001623 -
Psa6g2041 284 SUPERFAMILY Chaperone J-domain 31 107 IPR036869 -
Psa6g2041 284 PRINTS DnaJ domain signature 35 53 IPR001623 -
Psa6g2041 284 PRINTS DnaJ domain signature 53 68 IPR001623 -
Psa6g2041 284 PRINTS DnaJ domain signature 70 90 IPR001623 -
Psa6g2041 284 PRINTS DnaJ domain signature 90 109 IPR001623 -
Psa6g2041 284 MobiDBLite consensus disorder prediction 201 284 - -
Psa6g2041 284 MobiDBLite consensus disorder prediction 1 34 - -
Psa6g2041 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 284 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2041 Psa-Chr6 136584880 136590469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2041 35 95 C2H2 Transcription Factor Family AT1G74250 39.394 1.30e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2041 K09529 - gmx:100781463 384.03