Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2031 ATGTTGTGCTGTGGAGGTGCAGAAGAGGATTTTAACGGTTTAGCTGCAAACCATTATAGTGCAGCAGCAATCGGAGCTAACGCGTACGGTGCTGCTGGTGGTGGTGGTGGAGGTGGTGATAGAGGAGAGCCAAGGAGCAATATTGTGAAGAGTGGTGGTCCTCAGAAAGCATTAGAAATTGAGATACCCGAATTTAAGTTGAACGAGTTAAAGCGGTTAACAGAGAACTTTGGAACAAAAGCACTGATTGGGGAAGGTTCCTATGGGAGGGTTTTCCGTGCAAAGATGAGCGACGGTGTTGAGGCTGCAATTAAGAAGCTGGATACGAGTTCTTCACCAGAAGTTGACTCCGATTTTGAATCACAGTTAGCAATTGTTTCGAGATTGAAGAATGAACATTTCGTCGCTTTGATGGGATATTGTCTTGAGGCAAATAACAGAATTTTGGTTTATGAATATGCAAGTCTTGGTTCTTTGCACGACACATTACACGGAAGGAAAGGAGTTCAAGGGGCAGAACCTGGTCCGGTTTTAAATTGGAACGAGAGAGTAAAAATTGCGTTTGGTGCAGCCAAAGGACTTGAGTTTCTTCATGAGAAAGTTCAACCTTCTATAGTTCATAGAGATGTAAGATCCAGCAATGTCTTGTTGTTCAATGATTATGAGGCTAAGGTTGCAGATTTCAACTTGACAAATCAGTCTTCGGACACCGCAGCACGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCGATGACAGGACAAATAACCCAAAAAAGCGATGTATACAGTTTTGGTGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTGGATCATACAATGCCTAAAGGGCAACAAAGTCTTGTAACTTGGGCGACTCCAAGACTAAGTGAAGACAAAGTGAAACAATGTGTTGATCCTAAACTAAACAACGAGTATCCGCCAAAAGCAATCGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAGTATGAAGCAGATTTCAGGCCAAACATGACAATTGTTGTTAAAGCTCTTCAGCCACTTCTCAATTCGAAACCGGCTGGACCTAGCTCTAATGCTTGA 1113 0.4313 MLCCGGAEEDFNGLAANHYSAAAIGANAYGAAGGGGGGGDRGEPRSNIVKSGGPQKALEIEIPEFKLNELKRLTENFGTKALIGEGSYGRVFRAKMSDGVEAAIKKLDTSSSPEVDSDFESQLAIVSRLKNEHFVALMGYCLEANNRILVYEYASLGSLHDTLHGRKGVQGAEPGPVLNWNERVKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKVADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPSSNA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2031 370 Gene3D Phosphorylase Kinase; domain 1 50 153 - -
Psa6g2031 370 SUPERFAMILY Protein kinase-like (PK-like) 58 355 IPR011009 -
Psa6g2031 370 PANTHER OS03G0226300 PROTEIN 1 369 - -
Psa6g2031 370 ProSiteProfiles Protein kinase domain profile. 77 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2031 370 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Psa6g2031 370 Gene3D Transferase(Phosphotransferase) domain 1 155 365 - -
Psa6g2031 370 ProSitePatterns Tyrosine protein kinases specific active-site signature. 205 217 IPR008266 GO:0004672|GO:0006468
Psa6g2031 370 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Psa6g2031 370 SMART tyrkin_6 77 355 IPR020635 GO:0004713|GO:0006468
Psa6g2031 370 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2031 Psa-Chr6 135967605 135973341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2031 41 369 Receptor kinase-like Gene Family AT3G58690 43.491 1.49e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Psa6g2031 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2031 - - gmx:100777194 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2031 6 135967605 135973341 Psa6g2031 6 135967605 135973341 ECH
Psa3g1577 3 142098464 142101257 Psa6g2031 6 135967605 135973341 PCT