Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2022 ATGGATCCATCTTCTCTCTTCGGAATCGCACAGTTCTTCATCGACAAACTCGCTTCTCTTGCCGCCGAAGAACTTTCTCTAGCTCTCGGTGTCAAACAAGATTTACTTGAGATCCAAAACAAAGTCTCATTCATCAAAGCAGTGTTGCTGGACGCCGAGCAAAAGCAGAAGCAAAACAACGAGCTTGGCGAATGGTTGAAACAGATTAAGCGCATCTTATCAACCGCCGAAGACGTTATTGACGATTTCGAATGCGAAGCACTAAGGAAACAAGTCGTCAACACCTCCGGCAGCGTCAGAAGGAAGGTAAGGCATTTTGTTTCGAGTTCAAATCCTCTTATTTATCGCGTTAAAATGGCGCATCGTATCAAAGATATCAAAGAAAGATTAGATAAAGTTGCGGAAATTAGAGATAAGTTTGGCCTTCAAATCATTGACAGTGATAACCGTGTTGTGCAAAGGCGCGAAACTCATTCTGGTGTAAATGAATCTGATGTGATAGGAAGGGGAAAAGATAAACAGAAAATTGTAAAGCTATTATTGGAGGATAGTTATAGTGAAAAACTATCTATTGTTACTATTGTGGGAATTGGGGGTTTGGGGAAGACAACGCTTGCAAAAGCTGTGTTTAATGATAAGAGTGTAGTTGAATTTTTTCCATTGAAGATGTGGATATGTGTGTCCAATGATTTTGATTTTGAGAATCTGGTTGTTAAGATCATCAATTCTGTTCCTAGCCAAAATCACCACGAGAATGTTCGAAACCTTGGTTTGGAACAACTGCTAAAGAAAGTAAGGAATGCGCTTGCTGGTCAAAAGTTCTTACTCGTGTTGGACGATGTATGGAATGAGGATCGTGTCAAATGGGAAGAATTGAAAGATTTAATTCAAATTGGTGGTCAAGGATGTAAAGTCATAGTGACGACGCGGAGCCTAAAAGTTGCCGAGATGATGGGCACTCACTCGTCGTCTCTTGATTTGCAAGGTCTTTCTCGAGAGGATTCTTTGTCTGTGTTTTACAAATGGGCTTTCAAAGAAGGAGAGGAAAAAAGACATCCTGAATTGATGGAGATTGGGAAATGTATTGTAGATAAATGCGGAGGAGTTCCGTTGGCGCTAAGAACATTAGGGAGTTCACTTTTCTTAAAAGTTGATGTACGAGAATGGATGTTTGTGCGGGACAATGAGATTTGGAACTTACCACAAAAAGAAGATGACATTTTGCATGCTATCAAGTTAAGTTATGATCAGTTACCTTCTTATTTGAAGCGATGCTTTGCTTGTTTCTCCCTCTTTGAGAAAGACTTCCAATTCAACAGTTTTCATACTATTGTACTTTGGGAGGCACTTGGTTTTCTTCAATCACCACATAAGGGTGAAACATTGAAAGATATTGGCAATCAATATTTACATGAATTACAGTCAAGATCTTTTCTTCAGGATTTTATTGACTATGGCAGTGCTTACAAATTCAAATTGCACGATTTAGTGCATGATCTTGCATTGTATGTTTCAAGAGACGAGTTTCAATTGTTGAGCTCCTCTAGTGAAAACATATCTGAGAATGCCTTACATTTGTCGTATACTAAAAGTCATTTGCTTGGAAAAACCGACTTTCCCCTAGGTTTGAGAACCATACTTTTTCCTGTTGGAGTCAACAATGAAGCTTTCTTGAATACTTTGGTGTCAAGATGCAAATACTTGCGGGTTTTGCAAATAAATAATTCTGGATATGAGAGTTTGCCTCACTCCATTGGTAAGTTAAAACACTTACGATATCTCAATCTTGAAGATAATGAAGAACTCAAGAGTCTCCCTGATTCGGTGTGCAAACTCCAAAATTTAATAAATTTGAATCTCAGTGGATGCATAGAGCTACAAGAATTGCCCAATGGAATAGGAAACCTAATCAGCCTTCAACAACTACACATAACCACAAGGCAATCTAAATTTCCAGACAAAGAGATTGCAAAGTTGACTTCCCTGGAGATATTAACTCTTGTTTCTTGTGACAAATTGAAGTCATTGTTTGAAGGAATAGAGCTCCCTAGTCTTAAATATTTGGATATTGGTTCTTGTCGGAGTCTGAGATATGTGCCTCTTCATGTTATTCCAAACTTAGAGAGTTTGTCTATTGATGGCTGCAATAAGTTGAAATTGTCAATGGGCCATGATGACAACCAAATTGCCAAGTTGAGGTTAAAGTTATTGTATCTCGAATCTTTGCCCCAGCTGGCGACTTTTCCTCAGTGGTTGCGAGGTTGTGCGGAAACATTACAGTCCTTGGTAATTGTTGATTGTGACAATCTTGATGAGCTTCCTATGTGGTTGTCAACTCTGTTTTGTCTCAAAACACTTTCAATTGAAAATTGTCCAGGACTGCTTTCACTCCCGGATGATGTCCATCACCTGGCAAACCTTGAATATTTGAAAATGAAAGGATGTCCTGGATTATGCAGAAGATATCAGCCCAAAGTTGGACAGGATTGGCCCAAGATATCACATATCAAACAAGTTATCATTGAATCACTAGAACTAGAAAATTAA 2547 0.3875 MDPSSLFGIAQFFIDKLASLAAEELSLALGVKQDLLEIQNKVSFIKAVLLDAEQKQKQNNELGEWLKQIKRILSTAEDVIDDFECEALRKQVVNTSGSVRRKVRHFVSSSNPLIYRVKMAHRIKDIKERLDKVAEIRDKFGLQIIDSDNRVVQRRETHSGVNESDVIGRGKDKQKIVKLLLEDSYSEKLSIVTIVGIGGLGKTTLAKAVFNDKSVVEFFPLKMWICVSNDFDFENLVVKIINSVPSQNHHENVRNLGLEQLLKKVRNALAGQKFLLVLDDVWNEDRVKWEELKDLIQIGGQGCKVIVTTRSLKVAEMMGTHSSSLDLQGLSREDSLSVFYKWAFKEGEEKRHPELMEIGKCIVDKCGGVPLALRTLGSSLFLKVDVREWMFVRDNEIWNLPQKEDDILHAIKLSYDQLPSYLKRCFACFSLFEKDFQFNSFHTIVLWEALGFLQSPHKGETLKDIGNQYLHELQSRSFLQDFIDYGSAYKFKLHDLVHDLALYVSRDEFQLLSSSSENISENALHLSYTKSHLLGKTDFPLGLRTILFPVGVNNEAFLNTLVSRCKYLRVLQINNSGYESLPHSIGKLKHLRYLNLEDNEELKSLPDSVCKLQNLINLNLSGCIELQELPNGIGNLISLQQLHITTRQSKFPDKEIAKLTSLEILTLVSCDKLKSLFEGIELPSLKYLDIGSCRSLRYVPLHVIPNLESLSIDGCNKLKLSMGHDDNQIAKLRLKLLYLESLPQLATFPQWLRGCAETLQSLVIVDCDNLDELPMWLSTLFCLKTLSIENCPGLLSLPDDVHHLANLEYLKMKGCPGLCRRYQPKVGQDWPKISHIKQVIIESLELEN* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2022 848 PRINTS Disease resistance protein signature 191 206 - -
Psa6g2022 848 PRINTS Disease resistance protein signature 268 282 - -
Psa6g2022 848 PRINTS Disease resistance protein signature 366 380 - -
Psa6g2022 848 PRINTS Disease resistance protein signature 680 696 - -
Psa6g2022 848 SUPERFAMILY L domain-like 492 833 - -
Psa6g2022 848 Gene3D Ribonuclease Inhibitor 752 846 IPR032675 -
Psa6g2022 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Psa6g2022 848 Gene3D - 409 503 IPR036388 -
Psa6g2022 848 Gene3D Ribonuclease Inhibitor 550 751 IPR032675 -
Psa6g2022 848 Pfam NB-ARC domain 171 416 IPR002182 GO:0043531
Psa6g2022 848 PANTHER DISEASE RESISTANCE PROTEIN RP 32 822 IPR044974 GO:0006952
Psa6g2022 848 CDD RX-CC_like 8 135 IPR038005 -
Psa6g2022 848 Gene3D - 150 326 IPR027417 -
Psa6g2022 848 Coils Coil 66 86 - -
Psa6g2022 848 PANTHER OS08G0543100 PROTEIN 32 822 - -
Psa6g2022 848 Pfam Rx N-terminal domain 11 98 IPR041118 -
Psa6g2022 848 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2022 Psa-Chr6 135012293 135015450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2022 192 818 WRKY Transcription Factor Family AT5G45050 25.184 2.08e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2022 - - mtr:MTR_7g078640 1064.29