Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1977 ATGGGAATTCCTCAAGCCATGGTTGCTCTCCGAGAAAGAGCATCGTTCGTGAAAGACTCTCTTCACAGAAGCCAAACCATCACCGATAACATGGTTTCCATTCTCGGTTCCTTCGATCACCGTCTCTCCGCCCTCGAAACTGCAATGCGTCCCACTCAGATAAAAACGCATTCGATTCGAAGTGCACATGATAATATTGACAAGACTTTAAAAGCTGCAGAGGTGATTTTGACGCAATTTGATCAGACACGCAAGGCGGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAAAGCTATTTGGAAGCAGTTGATCAACTTAGAGCTAATGTTCGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGCAGTGATAGCATCATCAACCATGCAAACAGCTTGCTTGCTAAAGCTATTTTAAAGCTTGAAGATGAATTTAAACATCTTTTGACAAATTACAGCAAGCCTGTGGAACCTGATCGCCTTTTTGACTGCTTACCTAACTCTCTAAGACCATCAGCTTCTGGGCAGCAAAATGGTGGTGGTGGCAAAAACCATTCAGAAAAACCAAGCATAGAAACTGTTACTTTCACTCTCCCAACTCTTATTCCCCCCAGAGTTATACCTCTGCTTTATGAATTAGCACAACAAATGGTTCAAGCAGGCCATCAACAACAGCTCTTTCGAATCTATACAGACACCCGTGCCGCAGTCCTGGAGCAAAGTCTAAGAAAGTTAGGTGTTGAGAGGCTGAGTAAGGAGGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCTAAGATTGGAAACTGGATTCATTTCATGAGGATTTCTATCAAATTGTTGATTGTGGGGGAGAAAAAAATCTGTGATCAAATATTTGATGGTAATGAGTCTGTAAAAACTCAATGCTTTGCTGAAGCCACTGGCAGCAGTGTCGCTATGCTTCTTAGTTTTGGAGAGGCTGTTGCCAGAAGCAAGAGGTCACCTGAAAAACTATTTGTTCTTCTCGACATGTATGAGATAATGAGAGAACTTCAACCAGAGATTGAGATACTGTTTGATAGTAAAGTTTGCGCTGAAATGCGGGAAGCTGCAATCAATTTGACAAAGCGGCTTGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAGGCAGTTGAAAAAGATGCTACAAAAACTGCTGTGCAAGATGGAACTGTCCACCCTCTAACCAGCTATGTCATCAATTACGTGAAATTTCTCTATGATTATCAAGCAACTCTGAAGCAACTTTTTCAAGAGTTTGATCCTGGCGATCCAGAAGCTCAGTTAGCATCTGTTACAACAAGGATTATGCAGGCTCTCCAGAATAACTTAGATGGAAAGTCTAAACTATATAAGGACCCAGGACTAACCCAATTATTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGGGATGACTGGGTACAAATACACAGAAGAATTGTGCAGCAACATGCAAATCAATATAAAAGGATCTCTTGGGCAAAGATCTTGCAGTGCCTCACTGTCCAAGGAACTAATTCATCTGGTGGAGGGGACAGTGGAATTTCAAGAACAGCAGTTAAAGACAGGTTCAAGACATTTAACGCCCAATTTGAGGAGCTTCATCAGAGACAATCTCAGTGGACTGTTCCTGATAGTGAGTTGCGCGAATCACTTAGATTGGCTGTGGCCGAAGTTCTGTTGCCTGCCTATAGATCTTTCCTTAAGCGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTCAAAAATACATCAGATACTCTCCTGAGAATCTTGAACAAATGCTCGGTGAATTTTTCGAAAGCAAGGCGTGGAGTGAACAGAAGCGATGA 1899 0.4234 MGIPQAMVALRERASFVKDSLHRSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILTQFDQTRKAEAKILRGPHEDLESYLEAVDQLRANVRFFSSKKSFKSSDSIINHANSLLAKAILKLEDEFKHLLTNYSKPVEPDRLFDCLPNSLRPSASGQQNGGGGKNHSEKPSIETVTFTLPTLIPPRVIPLLYELAQQMVQAGHQQQLFRIYTDTRAAVLEQSLRKLGVERLSKEDVQKMQWEVLEAKIGNWIHFMRISIKLLIVGEKKICDQIFDGNESVKTQCFAEATGSSVAMLLSFGEAVARSKRSPEKLFVLLDMYEIMRELQPEIEILFDSKVCAEMREAAINLTKRLAQTAQETFGDFEEAVEKDATKTAVQDGTVHPLTSYVINYVKFLYDYQATLKQLFQEFDPGDPEAQLASVTTRIMQALQNNLDGKSKLYKDPGLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGTNSSGGGDSGISRTAVKDRFKTFNAQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPQKYIRYSPENLEQMLGEFFESKAWSEQKR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1977 632 Pfam Exo70 exocyst complex subunit 270 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa6g1977 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 628 IPR004140 GO:0000145|GO:0006887
Psa6g1977 632 Gene3D Exocyst complex component Exo70 74 632 - -
Psa6g1977 632 Coils Coil 359 379 - -
Psa6g1977 632 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 628 - -
Psa6g1977 632 SUPERFAMILY Cullin repeat-like 76 623 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1977 Psa-Chr6 126065924 126071640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1977 1 632 EXO70 exocyst subunit family AT5G52340 78.797 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1977 K07195 - gmx:100779774 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1977 6 126065924 126071640 Psa6g1977 6 126065924 126071640 ECH