Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1971 ATGGATGATGGTGATGTTGATGGGCATGAAATAATGCAAGCTAACTATCAAGCACTCAATGAGATTATACATGAGAATGGTCGTGTTAACCTTGATAGTGAATTGGATATTGTTAATGATGGATGCTTGGATATTATTGAATATGATAATGTAGTTGTTGATGAAGATTTTGAGTTTGTAGGAGGTGAATATGATTATGAAGATGGTGAATTTGATGGATGTGAATACGATGGTGAAGCTGGTTCTGGTGATGTTGGTGGAGACGAATCTTGGAATACAGATGCCAACAACGATGAAACTGATGGGGAAGAAGTTGCTTACACATTTTATGGTTGGTTTCCAAAGATGAACGAATTTGCAGTTCGTAAAGGTCAAGTTACTAAAAATAAGGATGAAGACGTTATTCAACAAACATTTTTTTGTAACCTTGAAGGATTTAGGCAAGACAGAGTAGAGCAACACAAGCATGGTCCGAAGCACGAAATTCGATGTGGATGTGGAGCAAAGTTTAGGGTGCATGTTGATATAATTTCACAAAAGTGGGGGTATGATAAGGTAGGACTTTTGAAGAAGGACATACATAATCAATTTTCAAGACAAAGAAAAGAGATGTTTTCTAATGTTAAAGGTGTTGTTAGGTATCTTATAGATCTTCGTGTTAAAGATCCATTAATGTTTGTTGCACACGAGGTGGGTGCGGATGGGACGATGCAAAACCTATTTTGGAGCGATGGTGAAAGTCAAAAGAATTATGAACTATTTGGTGTTGTGCTTGCTTTCAATGCTACATATAAGAAAAATAAGTACATGAGCCCGTTTGTTATTTTCTGGTGTTAA 837 0.3644 MDDGDVDGHEIMQANYQALNEIIHENGRVNLDSELDIVNDGCLDIIEYDNVVVDEDFEFVGGEYDYEDGEFDGCEYDGEAGSGDVGGDESWNTDANNDETDGEEVAYTFYGWFPKMNEFAVRKGQVTKNKDEDVIQQTFFCNLEGFRQDRVEQHKHGPKHEIRCGCGAKFRVHVDIISQKWGYDKVGLLKKDIHNQFSRQRKEMFSNVKGVVRYLIDLRVKDPLMFVAHEVGADGTMQNLFWSDGESQKNYELFGVVLAFNATYKKNKYMSPFVIFWC* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1971 278 Pfam FAR1 DNA-binding domain 108 183 IPR004330 -
Psa6g1971 278 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 99 275 IPR031052 GO:0006355
Psa6g1971 278 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 99 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1971 Psa-Chr6 125120419 125121671 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa6g1971 FAR1 6.9e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1971 - - mtr:MTR_1g070355 127.872