Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1964 ATGGCACCGGTGCAGCCGCACAACCGATGTAGAAGATGCTGTTGCTGCCTCTTCAGCATAATTTGGAAGCTTCTCTTGGCAATAATCATCCTCGTTGGTCTCATATACCTCATTTTCTCCCTCATCGTCCAACCACGAGCCTTCAAATTCAGTGTCAAAGAAGCAAAACTCACCCAATTCAACTACACCACCACCACCAACACACTCCGTTACAACCTCGTACTTAACTTCACGGCACGTAACCCAAACAAAAAACTCAACTTTTACTACGATGAAGTTGAGGGACATGTGTCCTACCACGGAACAAGGTTCGCTTCAACCGACATTATAACGTGGTTAAATTCGTTCCGTCAATACACCAAAAGCACGAACCTTATGAGTGGTGTTTTCTCAGGGCAACGTGTTGTGGTTTTTGATCAAGATCAAGTTTCTGATTTTGAACATGACAAGAAAGAAGGAGTTTTTCATATTGATGTGAAATTATACACTAAGATGAGGTTTAGGCTTGGTGATTATATTTTTGGAGATAATAAGAGTAACATTAAATGTGGGATTGATGTTCCTTTTTGTTCTAATGGGACCAAGCTAATGAATGCATTTGAACCCACCACATGTGATGTTCATTTTTAA 630 0.4063 MAPVQPHNRCRRCCCCLFSIIWKLLLAIIILVGLIYLIFSLIVQPRAFKFSVKEAKLTQFNYTTTTNTLRYNLVLNFTARNPNKKLNFYYDEVEGHVSYHGTRFASTDIITWLNSFRQYTKSTNLMSGVFSGQRVVVFDQDQVSDFEHDKKEGVFHIDVKLYTKMRFRLGDYIFGDNKSNIKCGIDVPFCSNGTKLMNAFEPTTCDVHF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1964 209 Pfam Late embryogenesis abundant protein 77 183 IPR004864 -
Psa6g1964 209 PANTHER OS05G0367900 PROTEIN 8 207 IPR044839 GO:0098542
Psa6g1964 209 PANTHER PROTEIN, PUTATIVE-RELATED 8 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1964 Psa-Chr6 124593377 124594715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1964 42 194 SNARE and Associated Proteins AT1G32270 31.210 2.26e-16 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0695 3 62216207 62216860 Psa6g1964 6 124593377 124594715 PCT