Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1961 ATGGCAGAAGCACAACACCACAACCGTATTAAAAGACGCTGTTGTTGCCTCTTCAACAACATAGTTTGGAAGATTCTCTTAGCAATAATCACCTTAGTCGCCCTCATAATCCTCATTTTATTCCTCGTCATAAGACCACGGACCTTCAAATTTAGTGTCAATGAAGCTAAACTTACTCAATTCAACTACACCACAACAACCAACACCCTCCATTACAACCTCGTACTCAACTTTACCGCACGTAACCCAAACAAAAACCTTAACATCTACTACGATGAAATAAATGGTCATGTATCCTATGAAGGAACAAGGTTTGCTTCAACAAACGTTATAACATGGTTAAATTCATTCCGTCAATACACGAAAAACACAAACCTTATGAGTGGTGTTTTCTCTGGAAAACGTGTTGTTGTTTTTGATCGTGATCAAGTTTCTGATTTTGGACGTGATAAGAATGATGGAGGTTTTCGAATTGATGTGAAATTATATTTCAAAATGAGGTTTGTGCTTGATGATTTTTATGGTGGACATAGTAAGGGTAACATTAAATGTGGACTTTATGTTCCTTTTGGTTCTAATGGGACGAAGGTCGTAAATGCATTTCAGCCCACCAAGTGTGATGTTAATTTCTGA 633 0.3728 MAEAQHHNRIKRRCCCLFNNIVWKILLAIITLVALIILILFLVIRPRTFKFSVNEAKLTQFNYTTTTNTLHYNLVLNFTARNPNKNLNIYYDEINGHVSYEGTRFASTNVITWLNSFRQYTKNTNLMSGVFSGKRVVVFDRDQVSDFGRDKNDGGFRIDVKLYFKMRFVLDDFYGGHSKGNIKCGLYVPFGSNGTKVVNAFQPTKCDVNF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1961 210 Pfam Late embryogenesis abundant protein 78 168 IPR004864 -
Psa6g1961 210 PANTHER OS05G0367900 PROTEIN 8 208 IPR044839 GO:0098542
Psa6g1961 210 PANTHER PROTEIN, PUTATIVE-RELATED 8 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1961 Psa-Chr6 124407043 124407925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1961 43 195 SNARE and Associated Proteins AT1G32270 30.573 2.04e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1961 - - gmx:100788062 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0696 3 62231588 62232280 Psa6g1961 6 124407043 124407925 PCT