Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1959 ATGTCAAATCAACTCAACGGCGCTTACTACGGCCCTTCCATCCCGCCGCCGCAACCCCACCGTCGCCACCGCAACGACAGCAGCTGCGGCTTCTGCAGCTGCCTCTGCGGCTGCTTCCGCGGCTGTTGCGGCTGCATCTTCAACTGCATCTTAAGCATAATCTGCAAAATCCTAACCACAATCCTCATCATCGCCGTAATCCTCGGCTTCCTCTTCTGGCTCATCGTCCGTCCTAATGTCGTCAACTTCACCGTCACCGATGCATCCCTTACTCGATTCAATTTCACCAACAACAACACACTTCACTACGATCTCGCCGTCAACATCACCATCCGAAACCCTAATCGGAGAATCGGTATCTATTACGATAACGTCGAAACGCTTGCGTTTTATAAGGATGTTATGTTTGGGAATCAAACACTAGGAGGATTCTTTCAGCATCATAAGAGTACGAATTTCTTGAATCCTGTTTTCAAAGGGGAACAAGTGATTCCGTTGAGTTCAGATCAGGTTTCGGAGTTTGATAAAGAGAAGGAAAGTGGAGTTTATGGAATTGATGTGAAGGTTTTGCTTAATGTGAGATTCAAATTAGGTTTGTTTAAATCAGGGAAAGCAAAACCTAAGGTTCGTTGTGATTTGCAGGTTCCTCTGAAATCAGGGAATGGAAGTTCTTTGAGTAATGTGTTTCAACCTACTGAATGTGATTGGGATTATAGATGGAAATTGTTCCATTAG 735 0.4517 MSNQLNGAYYGPSIPPPQPHRRHRNDSSCGFCSCLCGCFRGCCGCIFNCILSIICKILTTILIIAVILGFLFWLIVRPNVVNFTVTDASLTRFNFTNNNTLHYDLAVNITIRNPNRRIGIYYDNVETLAFYKDVMFGNQTLGGFFQHHKSTNFLNPVFKGEQVIPLSSDQVSEFDKEKESGVYGIDVKVLLNVRFKLGLFKSGKAKPKVRCDLQVPLKSGNGSSLSNVFQPTECDWDYRWKLFH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1959 244 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 16 238 - -
Psa6g1959 244 Pfam Late embryogenesis abundant protein 108 211 IPR004864 -
Psa6g1959 244 PANTHER OS05G0367900 PROTEIN 16 238 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1959 Psa-Chr6 123988870 123990348 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1959 75 224 SNARE and Associated Proteins AT1G32270 36.667 5.70e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1959 - - aprc:113873272 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1959 6 123988870 123990348 Psa6g1959 6 123988870 123990348 ECH