Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1930 ATGTCTTCATTTACTCAAAGTATATTTTTGCTATGTGTGCTGACATTGTTATCAACACAGAATACATTAGGAGTGCGTGTGAGTGTTCTTAACAACTTAGAACAAAATCTGGATTTAACCATTCACTGCAAATCTGCCGATAATGATTTGGGAGTTCATCTTCTTCATCATGGTGAAAGTTTTGGTTGGAATTTTAAAATTAGCCTTATTGGCCACACACTATACTATTGTTCCTTTGAATGGAATGGTGGGTTCCATTATTATGACATATACATAGCAAGTAGAGATTATAATGTATGTGATCCTTGCAATTGGTATATAACAAAATCAGGACCATGTAGGGTTCTAGCTCCAGGTTCTGCTGTTTGTGACTTTTGGAAAAAGTAA 387 0.3488 MSSFTQSIFLLCVLTLLSTQNTLGVRVSVLNNLEQNLDLTIHCKSADNDLGVHLLHHGESFGWNFKISLIGHTLYYCSFEWNGGFHYYDIYIASRDYNVCDPCNWYITKSGPCRVLAPGSAVCDFWKK* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1930 128 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 10 124 - -
Psa6g1930 128 PANTHER - 10 124 IPR010264 -
Psa6g1930 128 Pfam Plant self-incompatibility protein S1 27 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1930 Psa-Chr6 118912377 118913008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1930 27 115 Carbohydrate Esterase AT3G16970 37.634 4.30e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1930 - - mtr:MTR_1g058500 151.369