Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1905 ATGTCCAGCTCCAAAAAAAAACTAACCTTAAACACTGTCTCCATAAACCTCGGTTGTGGAACATGTAGAAGACCAAAACTTAGTTTCATATTCAACCCAAAACAAAAACACAAAAACCATCACCTTCATAACAAGTCTTCATCTTCTTCTTCTTCAAATTCAAATCCTTGGAGAGAACGAGCCAGAGACAATACCGAAACTTCAAGTAGCACCAGCAACACTACTACACCCACAACAAAAACGTCATTCCACTCAGATAAATCATCACCACTGAAAGGATTCGGAAGAGTCGGAAACGAAGGAGTAGCGGTTGAGAAAGATTCGGATGATCCTTATCTTGATTTCAGACATTCCATGTTACAAATGATATTGGAGAATGAGATATGTTCCAAGGATGATCTTAGAGAGCTTTTGAACTGTTTTCTTGAGCTGAATTCGATGGAACATCATGGGATTATTATAAGGGCTTTTACTGAAATCTGGAATGGAGTTTTCTCTGTTAAGTCTGGTTTTTCACCTCAACCGTAA 528 0.3826 MSSSKKKLTLNTVSINLGCGTCRRPKLSFIFNPKQKHKNHHLHNKSSSSSSSNSNPWRERARDNTETSSSTSNTTTPTTKTSFHSDKSSPLKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENEICSKDDLRELLNCFLELNSMEHHGIIIRAFTEIWNGVFSVKSGFSPQP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1905 175 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 102 162 IPR006458 -
Psa6g1905 175 MobiDBLite consensus disorder prediction 66 88 - -
Psa6g1905 175 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 169 IPR038933 GO:0045892
Psa6g1905 175 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 169 - -
Psa6g1905 175 Pfam Transcriptional repressor, ovate 108 164 IPR006458 -
Psa6g1905 175 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
Psa6g1905 175 MobiDBLite consensus disorder prediction 35 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1905 Psa-Chr6 116609331 116611122 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa6g1905 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1905 - - pvu:PHAVU_007G269800g 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1905 6 116609331 116611122 Psa6g1905 6 116609331 116611122 ECH