Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1879 ATGGACTCACACAAACAACTTTTCATCTTCCTATGTTATTCTCTAGTACTTGTACATCTCTCAGGGCTAGAAGTAGAGGCTAGTCGTCACCTCAAACATCATCCTTCAAAAGAGTTGTTCATTTTTGGAGACTCATATGTTGATGCTGGCAACACTCCAAAAAGCGATCTTGGTCCATGGAAAAAACCTTATGGCATAACCTTTCCCGGAAAACCTGCCGGAAGATTCTCCGATGGGAGAGTTTTATCTGACTTTATTGCCAAGTATCTGGGATTGAGATCACCGATTCCCCACAAATTCAGGAATATTGTACCTAAGAATTATTTGAAGTATGGAATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATCCATTTCAGGTCCAAATCTCACTACTCAAATCAATTCCTTCAACCAACTTGTTCAAGAACATGTTTATACTCAATCAGATATCACAAAATCTATTGCTTATGTATCTGTTGCTGGAAATGATTACAGTCATTACTTGGCCACAAATGGCTCTATCCAGGGTTTTCCATCTTTCATTGCCTCAGTGGTTAAACAAACAACCACCAATTTGGTTCAACTCCAAAAGTTAGGGTTTAAGAGAATTGTTGTTGGTGCTTTACAACCCCTTGGTTGTCTTCCTAGCGCGACTGCTCAAACATCATTCCGAAGTTGCGACAACACATCTAGTGACCTTGTAGCTCTCCACAACAATCTGTTGAACCAGTCTGTGACAAAGTTGAACCAAGACACCAATGATCACACTACCTTTGCAATTCTAGACATTTTCGACAGTTTCACGTCTGTGTTGAATAACCCTTCAAGCCATAACATCACGGAACGTTTTAAGCCATGTTGTTTTGGAGTAAGCAGTGAGTATAATTGTGGAAGTGTAGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAAAATCCGGAATCTACTTTCTTTTGGGATCGGTCGCACCCAACACAAGCAGCTTGGAATGCTGTGTATAATGACTTGAAGACAAAAAGTCTTGGTCAAATTTTATACTAG 1050 0.3933 MDSHKQLFIFLCYSLVLVHLSGLEVEASRHLKHHPSKELFIFGDSYVDAGNTPKSDLGPWKKPYGITFPGKPAGRFSDGRVLSDFIAKYLGLRSPIPHKFRNIVPKNYLKYGMNFAYGGTGVFDTSISGPNLTTQINSFNQLVQEHVYTQSDITKSIAYVSVAGNDYSHYLATNGSIQGFPSFIASVVKQTTTNLVQLQKLGFKRIVVGALQPLGCLPSATAQTSFRSCDNTSSDLVALHNNLLNQSVTKLNQDTNDHTTFAILDIFDSFTSVLNNPSSHNITERFKPCCFGVSSEYNCGSVDENNVKKYLVCENPESTFFWDRSHPTQAAWNAVYNDLKTKSLGQILY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1879 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 348 - -
Psa6g1879 349 PANTHER OSJNBB0059K02.9 PROTEIN 1 348 - -
Psa6g1879 349 SUPERFAMILY SGNH hydrolase 36 338 - -
Psa6g1879 349 Gene3D SGNH hydrolase 27 342 IPR036514 -
Psa6g1879 349 Pfam GDSL-like Lipase/Acylhydrolase 39 336 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1879 Psa-Chr6 113891190 113894178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1879 15 335 Pollen Coat Proteome AT1G75930 25.806 3.75e-24 99.8