Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1865 ATGTCAACCAGTAATTCTTTGATGACTCCGGAATTCAAATATACTGGCAATGGCGACGTTGCGTCGATCAAATCAATTGAAAATAGGACGAGCAACATTCTCAATATTTCAGACTCTTCCAAAATGGCAGATGTTGACACCATACTGAAGTCAAGAGCAAATAAAATTGTTGACCTTGACTGCAATTTCAAAGACCCGCGGTTTTGTGCATCCATTGCCAATGAAATCTACGAAAATTTGCGTGTATCTGAGAAAATTAAAAGGCCATCTATAGAATTCATGGAGAAGATACAGACAGACATCAATGCCGGCATGCGGGCAATGTTTATTGATTGGCTTGTGAAGGTTGCTGAAGAGTACAGACTTCTACCTGATACACTATTCTTGGCAGTTAACTACCTTGATCGCTATCTCTCAGGCAAAGCAATGAACAGACAGCGGTTACAACTACTTGGTGTTTCCTGCATGATGATTGCCGCAACCTACCAGAAGGAGAAAAAGGAAGCCTTCAGCCGGATAACAGAACTGATACCGTTCCAAAAAAAAAACTTCACAGTACACTTCAAAACCACACTTTCAATCATAACCCAACTATCCAACTTCTAA 606 0.4043 MSTSNSLMTPEFKYTGNGDVASIKSIENRTSNILNISDSSKMADVDTILKSRANKIVDLDCNFKDPRFCASIANEIYENLRVSEKIKRPSIEFMEKIQTDINAGMRAMFIDWLVKVAEEYRLLPDTLFLAVNYLDRYLSGKAMNRQRLQLLGVSCMMIAATYQKEKKEAFSRITELIPFQKKNFTVHFKTTLSIITQLSNF* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1865 201 Gene3D - 75 88 - -
Psa6g1865 201 Pfam Cyclin, N-terminal domain 75 166 IPR006671 -
Psa6g1865 201 PANTHER CYCLINS 1 163 IPR039361 -
Psa6g1865 201 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 163 - -
Psa6g1865 201 SMART cyclin_7 111 193 IPR013763 -
Psa6g1865 201 Gene3D - 89 164 - -
Psa6g1865 201 SUPERFAMILY Cyclin-like 64 164 IPR036915 -
Psa6g1865 201 CDD CYCLIN 105 160 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1865 Psa-Chr6 113164047 113165134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1865 2 175 Core Cell Cycle Gene Families AT1G44110 45.109 2.33e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1865 K06627 - nnu:104599819 195.282