Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1848 ATGGATCAACTTGAACCTTTATCCACCAATAATTCTCTAGTTTTTTCACTCATCACCTCCTTGATCATTACTTCAATCCTAATCATTTTTTTCACTAGTATTTTCCCATATCTCACATCATGTTTCCACAAACTCTTTAGTACTAGTCTCTTTTGTAGTTGTGAAATTTGCCAAGCTTATCTAACATCAAGTTGGTCAAAAGATTTCAACAATCTTTGTGATTGGTATTCTCATCTCCTACAAAAATCACCAACAAAAACCATTCACATACATGTGTTAAGAAACACAATAACCGCAAATTGTGAAAACCTTGAGTACATACTCAAAACAAACTTCGAAAACTACCCAAAAGGAAAACCTTTCTCATCAATCCTTGGTGATTTTCTTGGCCGTGGCATCTTCAACGTGGATGGTGAACTATGGAAGTTTCAAAAGAAGATGGCAAGCTTAGAACTCAACAAAAACTCCATAAGATCCTTTGCTTTTGAAGTTGTCAACAACGAAATCCATCACCGTCTCATCCCTCTACTCAAAAACCAAAACGAGGTAGCTTTGGATTTGCAAGACGTTTTCAAGAGATTCTCTTTCGATAGTATCTGTAGATTTTCCTTCGGTTTAGACCCTATGTGTTTAGAAAAATCACTACCCATGTCGGATTTCGCTCTTTCTTTCGATCTAGCATCAAAACTATCGGCAGAAAGAGCCATGGTTGTGTCTCCACTAATATGGAAAATCAAAAGATTCTTCAACATGGGTAGTGAGAAAGAGTTGAAAAAAAGCATCAATATCATTAACATGTTAGCCAAAGTTGTTATAAACCAAAAAAGAAAAATGGGTTTTTCCAATCATCAAGATTTGTTATCAAGATTCATGAGTACAACAATTCACGACGACATGTTTCTCAGAGACATAGTCATAAGTTTCTTATTAGCCGGTCGTGACACCGTAGCGTCATCGCTCACAAGTTTCTTTTGGTTATTAGCGAAAAACCGTGAAGTCGAGTCAGAGATTTTGTCAGAAGCTGAACGAGTAATAGGAGTAGGAAACAACTTTGGAGTAACGAATTTCGAGCAACTTAGCAAGTTACATTATTTACAAGCTGCAGCATATGAGAGTATGAGACTTTATCCACCGATTCAATTTGACTCAAAGTTTTGTTTGGTGGATGATGTTTTACCAGACGGTACGAGAGTGAAAAGTGGAACTAGGGTTACTTATCATCCTTATGCAATGGGTAGGTTGGAGGAATTATGGGGTGAAGATTGTTTGGAGTTTAAGCCTCAAAGGTGGTTGAAAGATGGTGTGTTTCAACCTACAAATCAGTTCAAGTATCCTATTTTTCAAGCTGGGTTGAGGGTTTGTATTGGTAAAGAAATGGCTTTGATGGAACTTAAAAGTGTGGCAATTTCTTTGCTTAGAAAGTTTCGTTTTGAGTTGGAGGAAACATCATCAACAACAACAACGTTGGGTTGTGATAATCCTAGATTCTCTCCTGGTCTTACTGCCACTTTTGCTTTTGGTCTACCTGTGTTTGTTCGTGAAAGAGGAACCGATTGTGAAGCATAG 1566 0.3736 MDQLEPLSTNNSLVFSLITSLIITSILIIFFTSIFPYLTSCFHKLFSTSLFCSCEICQAYLTSSWSKDFNNLCDWYSHLLQKSPTKTIHIHVLRNTITANCENLEYILKTNFENYPKGKPFSSILGDFLGRGIFNVDGELWKFQKKMASLELNKNSIRSFAFEVVNNEIHHRLIPLLKNQNEVALDLQDVFKRFSFDSICRFSFGLDPMCLEKSLPMSDFALSFDLASKLSAERAMVVSPLIWKIKRFFNMGSEKELKKSINIINMLAKVVINQKRKMGFSNHQDLLSRFMSTTIHDDMFLRDIVISFLLAGRDTVASSLTSFFWLLAKNREVESEILSEAERVIGVGNNFGVTNFEQLSKLHYLQAAAYESMRLYPPIQFDSKFCLVDDVLPDGTRVKSGTRVTYHPYAMGRLEELWGEDCLEFKPQRWLKDGVFQPTNQFKYPIFQAGLRVCIGKEMALMELKSVAISLLRKFRFELEETSSTTTTLGCDNPRFSPGLTATFAFGLPVFVRERGTDCEA* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1848 521 Pfam Cytochrome P450 102 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 38 509 - -
Psa6g1848 521 PANTHER CYTOCHROME P450 38 509 - -
Psa6g1848 521 Gene3D Cytochrome P450 59 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 SUPERFAMILY Cytochrome P450 70 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1848 521 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1848 Psa-Chr6 110199176 110201363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1848 43 515 Cytochrome P450 AT2G27690 57.620 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1848 K20624 - gmx:102662117 694.886