Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1809 ATGAGTTACAGCGGCGAAACATTGGACTTCCGAAACCTTAAGGTAATATCCGCTGTCGGACGCGGCGCCAAAGGCGTTGTGTTTCTCGCGAGAATCTACGGATCGTCGAAACCGGAATGGTTGGCTTTGAAAGTTATATCGAAAGAGCTTCAAAAGAAAAAGAACAATAACAGAAATGATAAATGCAAAAGAGTTTTGTTTGAACAACAAATACTACGTCGTTTTGATCATCCACTTTTGCCACGGTTAAAAGGAGTTTTTGAAACGGAGAAACTCGTTGGATTCACTATGGATTATTGTCACGGTGGGAATTTGCATTATCTTAAGAAAAAACAACCGGATAAAAAGTTCTCTGAAGAAACCATTAGGTTTTATGCTGTGGAATTGGTGTTGGCATTGGAATATTTACACAATTTAGGAGTAGTTTATAGAGATCTGAAGTTGGAAAACATTATGATTCAACAAACGGGTCACATAATGCTGGTAGATTTCGACCTATCAAAGAAACTGAATCCGAAATCACCAAACTCACTGAGTTGCAACTCGTCACCAGGTTCAAACTCGCAAGGTGTGAAAAACAGAAGGATGAAATGGTTGTCGCACTTTTATTGTCATTGTCCTACTAGGAAAGCGGAATTCGACCCAGTGAGTCAGATTGATCCTAACTCAATGTGTAAAAGGAGCGAGTCAGATTCGGTTGAGAAATCCAACTCGTTCGTAGGAACTGAGGATTACGTGGCACCTGAAGTTATCGAGGGGCATGGACACAACTTTGCTGTTGATTGGTGGTCATTTGGTGTCGTTTTGTATGAAATGCTTTATGGAACGACGCCGTTTAATAGTCCTAATAGAAAGGAAACGTTTCATAAAATTTTAACTATGGAGCCTGAACTAAAGGGCGACATGACACCGTTGAAGGATTTGATTGTGAAATTGCTCGAGAAAGATCCTGACCTTAGGATTCAAATTGATGAAATAAAGGGTCACAATTTCTTTAAAAGTGTAAAGTGGAACATTGTGTTGGGAATTACTCGTCCACCTTATATTCCTCCTAATGAAATTGTGGACAAAACTGGATTTTCAAGGAAAGAGGTTGAGTCATTTGTTCATGGAATTTTTTTTCCTAAAAGTAAAAATAATACTAATGGTGAAAAGGAGAAAAATAATGAAGAGATTAAAAAGGATGGAAAGGAGAAGGATGAGAACGAAGATATCAATGATTGTGGTAATAAGAATGTTTGGGTTGAGAAATTGAGTAAGAATCATATTAGAGATGATAATTTCTTGATTTTTTAA 1296 0.3765 MSYSGETLDFRNLKVISAVGRGAKGVVFLARIYGSSKPEWLALKVISKELQKKKNNNRNDKCKRVLFEQQILRRFDHPLLPRLKGVFETEKLVGFTMDYCHGGNLHYLKKKQPDKKFSEETIRFYAVELVLALEYLHNLGVVYRDLKLENIMIQQTGHIMLVDFDLSKKLNPKSPNSLSCNSSPGSNSQGVKNRRMKWLSHFYCHCPTRKAEFDPVSQIDPNSMCKRSESDSVEKSNSFVGTEDYVAPEVIEGHGHNFAVDWWSFGVVLYEMLYGTTPFNSPNRKETFHKILTMEPELKGDMTPLKDLIVKLLEKDPDLRIQIDEIKGHNFFKSVKWNIVLGITRPPYIPPNEIVDKTGFSRKEVESFVHGIFFPKSKNNTNGEKEKNNEEIKKDGKEKDENEDINDCGNKNVWVEKLSKNHIRDDNFLIF* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1809 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Psa6g1809 431 Gene3D Transferase(Phosphotransferase) domain 1 104 175 - -
Psa6g1809 431 Gene3D Transferase(Phosphotransferase) domain 1 224 351 - -
Psa6g1809 431 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 5 413 - -
Psa6g1809 431 PANTHER FLIPPASE KINASE 1-RELATED 5 413 - -
Psa6g1809 431 SMART serkin_6 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1809 431 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Psa6g1809 431 ProSiteProfiles Protein kinase domain profile. 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1809 431 MobiDBLite consensus disorder prediction 379 404 - -
Psa6g1809 431 SUPERFAMILY Protein kinase-like (PK-like) 12 359 IPR011009 -
Psa6g1809 431 Pfam Protein kinase domain 15 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1809 431 Pfam Protein kinase domain 234 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1809 431 MobiDBLite consensus disorder prediction 380 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1809 Psa-Chr6 105100194 105101604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1809 7 431 AGC Kinase Gene Family AT3G25250 50.000 3.25e-130 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa6g1809 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1809 K20714 - gmx:100813693 521.161