Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1803 ATGGAAATGCCTGCGAGAAGATCTAATTACTCTATTCTAAGTCAAGTTCCCGATGATCCGTTTTCGTATGCTGCCGGAGCTAGTGCTCCGTCGTCTTCCAGTGACGGGAAAGCGAGTAGAGGCGGAAAGTTAGATAGAGGTTTAGGTTTTGATTGGGAGTTAGTTGGTGGTGATCATAGGTCAACTCAGCAAGGGAACAATCGGATCGGGAATTTGTACTCTTCTATTGGGTTACAGAGACAATCCAGCGGGAGTAGTTATGGGGAAAGCTCGTTATCTGGTGGAGGAGAGTATTATGCACAGACGCTGTCCGTGGCGGCGGCTAGTGAGGTGGATGCATTTGGATATTTGCATGATGATGGATTTAAGGTGGGTGAGGTGAGGAACAAGTTGTCTGAGGGTCCGGGTTGGACTGGCGGATCTTCTGGGAAGAGCTGGGCTCAGCAGACGGAAGAGAGTTATCAGTTGCAGCTTGCTTTGGCGTTGAGGCTGTCCTCGGACGCAACTTGTGCGGATGATCCGAATTTTCTGGATCCGGTGCCGGAAGAAGCTTCTTTGAGGCTCTCGTCTTCCCCTGAGGCTTTGTCTCATAGATTCTGGGTGAATGGCTGCCTATCGTACTCTGATAAAATCCCCGATGGATTTTACTTAATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAACAGTCGAATCCCATCAGTCGATACTCTAAAGTCTGTGCATCCCCGCACCGGTTCTTCCCTTGAAGTAGTTTTGGTGGATCGGCGCTATGATGCCAGCTTGAGAGAACTGCAAAACATAGTTCATGACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTTTCGAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGCTGGGGAGGATGAATTTCTTTCTTTCTGGAGGGATTGCAGTAATAACCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCCATAGGTAGTTTATCTGTTGGCCTCTGCAGGCATCGTGCCATATTGTTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAAGGATGTAAATATTGCAAAAGAGATGATGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGACAGTTATGCGAACCCGATTCTTTGCTGAATGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAAACTACAATTGATTTCAGGTCACTTGCCAAACAGTATTTCTCAGACTGTCTATCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGAACAGTTTGATGGGAAAAGCAATGAAAGGAATAACCTTAGGCCAATTTCGAGTGACATCAACAGAAGCTCTCACCTTCCTTTGTATCCGCAATCTGCTCTTCCGAGCACGCATGATCAAGCTTCTGAAACATATATGTTATGTAACCCTCCTCAGAATATTATAGACTCAACAACTGTGGGCAAGTATCCACCTCCTTTAAAGCATAAGCGTCCTGTTTGTATTTCCAATGATGATGTCATTGAGGGTAGGAGGTTTGTCGAAGGAAGTCAACTGATTCCTAGCAAGCCTACTCGAGAGGTTGCCTTTGACATGGAGGATTTAGCCATACCGTGGAATGATCTTAATTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAAGAATTCATGAGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACTCAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAGGGGTAGCTTATATAGACTGTTGCATAGACCCGGTGCCAAGGAAGTTTTGGATGAGAGGCGTAGGCTTAGTATGGCTTACGACGTGGCAAAGGGGATGAATTATCTTCACAAACGCAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAATCTTCTTGTTGACAAGAAATACACTGTGAAGGTTTGTGATTTTGGACTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTTCGCGACGAGCCATCAAATGAGAAGTCTGATCTTTACAGCTTTGGGGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAATCCAGCACAGGTTGTTGCTGCTGTTGGCTTCAAGGGAAAAAGGCTCGAGATCCCGCGCGAGTTGAATCCCCAAATAGCTGCCATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGGCCTTCTTTTGCGAGCATTATGGATTCTCTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAACATGCCGCCTCTCACCTGA 2529 0.4547 MEMPARRSNYSILSQVPDDPFSYAAGASAPSSSSDGKASRGGKLDRGLGFDWELVGGDHRSTQQGNNRIGNLYSSIGLQRQSSGSSYGESSLSGGGEYYAQTLSVAAASEVDAFGYLHDDGFKVGEVRNKLSEGPGWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPEEASLRLSSSPEALSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRTGSSLEVVLVDRRYDASLRELQNIVHDISCSSITTTEVVDQLSKLVCNRMGGSASAGEDEFLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLEREYLVDLIGKPGQLCEPDSLLNGPSSISFCSPLRFPRLKPAETTIDFRSLAKQYFSDCLSLELFFDNSSAEQFDGKSNERNNLRPISSDINRSSHLPLYPQSALPSTHDQASETYMLCNPPQNIIDSTTVGKYPPPLKHKRPVCISNDDVIEGRRFVEGSQLIPSKPTREVAFDMEDLAIPWNDLNLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDLYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLPNMPPLT* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1803 842 PRINTS Tyrosine kinase catalytic domain signature 642 655 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 PRINTS Tyrosine kinase catalytic domain signature 683 701 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 PRINTS Tyrosine kinase catalytic domain signature 730 740 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 PRINTS Tyrosine kinase catalytic domain signature 749 771 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 PRINTS Tyrosine kinase catalytic domain signature 793 815 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 Gene3D Transferase(Phosphotransferase) domain 1 647 831 - -
Psa6g1803 842 SMART serkin_6 568 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1803 842 MobiDBLite consensus disorder prediction 23 42 - -
Psa6g1803 842 ProSitePatterns Protein kinases ATP-binding region signature. 574 595 IPR017441 GO:0005524
Psa6g1803 842 Pfam Ethylene-responsive protein kinase Le-CTR1 193 398 - -
Psa6g1803 842 Gene3D Phosphorylase Kinase; domain 1 561 646 - -
Psa6g1803 842 SUPERFAMILY Protein kinase-like (PK-like) 543 821 IPR011009 -
Psa6g1803 842 ProSiteProfiles Protein kinase domain profile. 568 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1803 842 CDD STKc_MAP3K-like 574 822 - -
Psa6g1803 842 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 134 830 - -
Psa6g1803 842 Pfam Protein tyrosine and serine/threonine kinase 568 822 IPR001245 GO:0004672|GO:0006468
Psa6g1803 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Psa6g1803 842 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 134 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1803 Psa-Chr6 104804811 104814684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1803 1 833 MAP Kinase Kinase Kinase AT5G03730 64.925 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa6g1803 PK_Tyr_Ser-Thr 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1803 K14510 - gmx:100800648 1348.18