Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1797 TATAAAAATCAAAATATTGCAGTTAAAATTATCAACAAGGGAGAAAACACAGAAGAGATTTCAAGGAGAGAGGCTCGGTTTGGTAGAGAGGTTGCAATGCTATCGAAAGTTCAACACAAAAATTTAGTCAGGTTTCTCGGGGCCTGCAAAGACCTGTGA 159 0.3836 YKNQNIAVKIINKGENTEEISRREARFGREVAMLSKVQHKNLVRFLGACKDL* 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1797 52 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Psa6g1797 52 Pfam Protein tyrosine and serine/threonine kinase 3 50 IPR001245 GO:0004672|GO:0006468
Psa6g1797 52 PANTHER PROTEIN KINASE ATN1 1 51 - -
Psa6g1797 52 ProSiteProfiles Protein kinase domain profile. 1 52 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1797 52 PANTHER SERINE-THREONINE PROTEIN KINASE 1 51 - -
Psa6g1797 52 SUPERFAMILY Protein kinase-like (PK-like) 3 51 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1797 Psa-Chr6 104568314 104568955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1797 1 51 MAP Kinase Kinase Kinase AT5G40540 64.706 9.89e-22 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa6g1797 PK_Tyr_Ser-Thr 1.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1797 - - mtr:MTR_6g004440 93.5893