Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1788 ATGGAACTCTCTCTTCTCACCCATCAGCACAATCCTTTACTCGCCTCCAATCTCTTCACAAGAACACACAAAAAATTGTACAACAAAAATTCAAGTAGGTTATTACCATGTAGCTGTTCACATTCTTCTTCCAATAATGCTTCTGTAGAACCAGTTAATGTGTCTTCACAAATTGAAGGAAGAAGAGCATTACTCACTTGTCTCCTCACAACATTTGCTGGAGTCTATGCATGTGATGTGGCTGAAGCTGTTAGCACTAGTAGAAGAGCGCTAAGAGGGGCCAAAATTCCTGAAAGTGATTTCAAAACCTTGCCGAATGGTTTGAAATACTATGATTTGAAGGTTGGAAATGGAGCTGAAGCTGTGAAAGGATCGCGTGTTGCAATTCACTATGTTGCTAAATGGAGGGGAATCACATTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGACGTAGGCGAATCTGAGAGAGGAAATGTCCTAAAAGGTTTGGATTTAGGAGTAGAAGGCATGCGAGTTGGAGGTCAGCGACTGTTAATTGTTCCACCTGAACTTGCCTATGGAAGCAAGGGAGTTCAAGAAATCCCTCCAAATGCAATAATAGAGGTGGATGTGGAACTGCTTGCCATTAAACAGAGCCCATTTGGGACTGCTGTAAAGATTGTTGAAGGCTAA 696 0.4239 MELSLLTHQHNPLLASNLFTRTHKKLYNKNSSRLLPCSCSHSSSNNASVEPVNVSSQIEGRRALLTCLLTTFAGVYACDVAEAVSTSRRALRGAKIPESDFKTLPNGLKYYDLKVGNGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNAIIEVDVELLAIKQSPFGTAVKIVEG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1788 231 SUPERFAMILY FKBP-like 89 218 - -
Psa6g1788 231 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 8 231 - -
Psa6g1788 231 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 120 215 IPR001179 GO:0003755
Psa6g1788 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 8 231 - -
Psa6g1788 231 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 124 218 IPR001179 GO:0003755
Psa6g1788 231 Gene3D - 80 225 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1788 Psa-Chr6 103778384 103780233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1788 124 218 Calmodulin-binding Proteins AT5G48570 41.237 4.37e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1788 - - gmx:100815603 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1788 6 103778384 103780233 Psa6g1788 6 103778384 103780233 ECH