Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1771 ATGCCATGTTCACTCCCTCTCTCTCATCTTTCTCTCTCCTCCCTCTCAAAAAACCCACTCACCTCTTCCCCCTCCCCTCAAAAACCTTATCCACTTCACCACCGTCTCTTTGTTAAATCCTCCATCAACAAAAACCCAGAAACAACCACCAAAACCAGTTCATGGGTGAGTCCAGATTGGCTCACTTCACTCTCCAAGTCTCTAACCACAGCAAAAGATGATTCTGGCATTCCTATAGCAAGTGCTAAGCTTGATGATGTTTCTGATCTTTTGGGTGGTGCTCTTTTTCTTCCTTTGTTTAAATGGATGAATGAGTATGGTCCTGTTTATCGTTTGGCTGCTGGTCCTAGGAATTTTGTTGTTGTTAGTGACCCTGCCATTGCGAAACATGTGCTCAAGAATTATGGTAAATATGGTAAAGGTCTTGTTGCTGAGGTGTCTGAGTTTCTTTTTGGGTCTGGATTTGCTATTGCTGAAGGGCCTCTCTGGACGGCAAGGCGTAGGGCTGTCGTTCCATCACTTCACAAACGATACTTGTCGATTATGGTAGATAGAGTGTTTAGTAGATGTGCTGAGAGATTAGTAGAGAAGCTACAACCTGATGCAATTAACGGAACTGCTGTTAACATGGAGGACAAATTTTCTCAGTTGACTCTTGATGTTATCGGTTTATCTGTATTCAACTATAACTTTGACGCACTGAATTCAGACAGTCCTGTTATTGAAGCTGTTTACACTTCACTGAAAGAGGCAGAGGCTCGGTCAACCGATCTTTTACCATATTGGAAGGAAAGTTCTTTTCTCATCACACGGTTTTTGATATGGAGTTTGGATTTTCTTTGTGTTTGTCAATTTTCATGCCTTTTTATTTCTCGTTCTTTGTTGCTACAGGTTGGTTTTCTTTGTAAGATAATACCGAGACAAATAAAGGCTGAAAAGGCTGTTAGTGTTATTAGAGAAACTGTAGAAGATCTTATTGCTAAATGTAAAGAGATTGTAGAGTCTGAGGGTGAAAGAATTGATGCTGATGAATACGTAAATGATGCTGATCCTAGTATTCTCCGGTTTTTGCTTGCCAGCAGAGAAGAGGTTTCAAGTGTGCAATTAAGGGATGATCTTTTATCAATGTTAGTTGCCGGTCACGAGACCACTGGTTCGGTGCTTACTTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCGTTAGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAAGGACGACGTCCTTCCTATGAAGATATTAAAGGTCTTAAGTTCTTGACGCGCTGTATTATGGAGTCACTCCGACTTTATCCACATCCTCCTGTATTGATCAGAAGATCTCAAGTCCCCGATGAGCTTCCGGGTGATTACAAAGTCAATGCTGGTCAAGATATTATGATTTCGGTATACAACATACATCGTTCTTCTAAGGTTTGGGATAGGGCCGAAGAGTTTTTGCCGGAAAGATTTGATTTGGATGGTCCAGTGCCAAATGAAACAAATACAGATTTCAGATTCATTCCGTTTAGCGGAGGGCCTCGAAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTACTGTTGCTCTTGCGGTCTTTCTACAGCACATGAACTTTGAGCTTGTTCCTAATCAGAATATCGGCATGACTACTGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTGAGCCAACGGTTGAAATAG 1722 0.4129 MPCSLPLSHLSLSSLSKNPLTSSPSPQKPYPLHHRLFVKSSINKNPETTTKTSSWVSPDWLTSLSKSLTTAKDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSIMVDRVFSRCAERLVEKLQPDAINGTAVNMEDKFSQLTLDVIGLSVFNYNFDALNSDSPVIEAVYTSLKEAEARSTDLLPYWKESSFLITRFLIWSLDFLCVCQFSCLFISRSLLLQVGFLCKIIPRQIKAEKAVSVIRETVEDLIAKCKEIVESEGERIDADEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPSYEDIKGLKFLTRCIMESLRLYPHPPVLIRRSQVPDELPGDYKVNAGQDIMISVYNIHRSSKVWDRAEEFLPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAVFLQHMNFELVPNQNIGMTTGATIHTTNGLYMKLSQRLK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1771 573 Pfam Cytochrome P450 99 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 Pfam Cytochrome P450 309 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 115 571 - -
Psa6g1771 573 PANTHER CYTOCHROME P450 FAMILY 4 115 571 - -
Psa6g1771 573 PRINTS P450 superfamily signature 379 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 368 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 388 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 471 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 Gene3D Cytochrome P450 78 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 SUPERFAMILY Cytochrome P450 92 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1771 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1771 Psa-Chr6 103042202 103046186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1771 25 571 Cytochrome P450 AT3G53130 75.182 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1771 K09837 - gmx:100797221 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1771 6 103042202 103046186 Psa6g1771 6 103042202 103046186 ECH