Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1764 ATGTTGGTTCCTCCATGGCTCACACCACTTCTCAACACACCATTCTTTAACGTGTGTCGGATTCACAGCGACGCCGCGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACATTGATGCTTTTTGCTTCTATTGTCGTTCTTCAAGACACAAAGATCATCAAGTTATTCAGATAAGGAGATCTTCATATCATGATGTAGTGAGGGTGGGTGAAATTCAGAAAATGTTGGATATTAGTGGAGTTCAAACGTATGTGATTAATAGTGCTAGAGTTTTGTTTCTGAATGAAAGGCCACAACCAAAATCTGGAAAAACAGGGGCTTATATTTGTGAGATTTGTGGAAGAAGCCTCTTAGATCAAGTTCGTTTTTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGCAATGCAAGCTTTGTTTTAGATGCTAATAACAATCAAGTATCAACAATGGAAGAAGGAATGTCAAGGAGAACAATCTCTTCAAGACAAGAAGAGGAAGAAGAATTGCGTGAAGGCTCAGAACAAGGAATGTATCTAGCCACACCTTCAAATGCAAGAAGAAGAAAAGGAATTCCTCATAGAGCTCCTTTTGGTTCCTAA 612 0.3856 MLVPPWLTPLLNTPFFNVCRIHSDAARSECNMFCLDCNIDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVGEIQKMLDISGVQTYVINSARVLFLNERPQPKSGKTGAYICEICGRSLLDQVRFCSLGCKLVGIKRNGNASFVLDANNNQVSTMEEGMSRRTISSRQEEEEELREGSEQGMYLATPSNARRRKGIPHRAPFGS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1764 203 SUPERFAMILY B-box zinc-binding domain 15 61 - -
Psa6g1764 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 202 - -
Psa6g1764 203 MobiDBLite consensus disorder prediction 161 177 - -
Psa6g1764 203 Pfam PLATZ transcription factor 60 131 IPR006734 -
Psa6g1764 203 MobiDBLite consensus disorder prediction 155 203 - -
Psa6g1764 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1764 Psa-Chr6 102680662 102682576 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa6g1764 PLATZ 1.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1764 - - gmx:100809455 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1764 6 102680662 102682576 Psa6g1764 6 102680662 102682576 ECH