Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1763 ATGATGGACCCCAATGGAATGTTTTCTCCCATCACTACTACTGGTTTGCTAGGAGTAGTTGATAATAATATCCCTTTACAACAGCAACAACAACAACAAAATCTCCCTATTCAACAACAGAATCCCCACCATTTGCACCTTTCCCAAGCTGTTTCCTATGCTCCCCATGCTCATGACACTGACACACATCATCAACAACAACAATTGCATCAATCAATGAAACATGGGTATCCACCTTTTTCTTCATCCAGAAACAAACAACAGCAACAGCCGCAGCAGCAGCAAGGTTCTCAGGTTAGTGATGAGATTGAGGATGAGCCAAGTTTTCAAGCTGATGAAACCTCTGGTGGTGACCCAAAGAGGAAATTTTCACCGTGGCAAAGAATGAAATGGACTGATACAATGGTAAGGCTTTTGATAATGGCTGTTTATTACATTGGTGATGAAGGTGGTTCTGAAGGGACTGATCCAATGGGTAATAAGAAGAAATCAAGTGGTTTGTTACAGAAGAAAGGGAAATGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTGTCACCTCAACAATGTGAAGATAAGTTCAATGATTTGAATAAAAGGTACAAGAGAGTGAATGATATTCTTGGAAAAGGGACAGCTTGTAGGGTAGTTGAAAATCAGAATTTGTTGGATTCAATGGATTTGACACCTAAGATGAAAGATGAAGTTAGGAAATTGCTGAATTCTAAGCATCTTTTCTTTAGGGAAATGTGTTTAAGGATGTTGAAAATAGGAAGTGGAGAAGTTGAAGAGGAGGAGGATGAAGATGAAGATGAGGAATCAGAGGACTATTCTGATGAAGATGAAGATGAATCAGGAGAAGGTGGTTCAAAGTGTCAACAAGATGAAGATGAGAATGACGGGAAACCATCAAAGAAAAGGCGAAGAAAAGAAGGAGGATTTCCCATTTCTATGTCATCCTCATCATTACCATTGATGAACCAAATGAACAATGAAATAAGTGGTGTGTTTCAAGATGGTGGAAAAAGTCCATGGGAGAAAAAACAATGGATAAGAAACAAAATTTTGCAGTTGGAGGAACAGAAAATAAGCTATGAATCACAAGGTTTTCAGTTGGAAAAACAAAGGTTGAAATGGGCAAGGTATAGTAGCAAGAAAGAGAGGGAAATGAAGAGAGCAAAACTTGAAAATGAAAGGAGAAGATTAGAAAATGAAAGAATGGTTTTGCTTATTAGGAAGAAGGAGATTGAATTGATGAATATTCAACAGCAACAACATCAACAACAACAACATTCTTCTACTTAG 1314 0.379 MMDPNGMFSPITTTGLLGVVDNNIPLQQQQQQQNLPIQQQNPHHLHLSQAVSYAPHAHDTDTHHQQQQLHQSMKHGYPPFSSSRNKQQQQPQQQQGSQVSDEIEDEPSFQADETSGGDPKRKFSPWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDPMGNKKKSSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDSMDLTPKMKDEVRKLLNSKHLFFREMCLRMLKIGSGEVEEEEDEDEDEESEDYSDEDEDESGEGGSKCQQDEDENDGKPSKKRRRKEGGFPISMSSSSLPLMNQMNNEISGVFQDGGKSPWEKKQWIRNKILQLEEQKISYESQGFQLEKQRLKWARYSSKKEREMKRAKLENERRRLENERMVLLIRKKEIELMNIQQQQHQQQQHSST* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1763 437 MobiDBLite consensus disorder prediction 264 289 - -
Psa6g1763 437 MobiDBLite consensus disorder prediction 66 104 - -
Psa6g1763 437 Coils Coil 388 415 - -
Psa6g1763 437 MobiDBLite consensus disorder prediction 261 327 - -
Psa6g1763 437 PANTHER F16F4.11 PROTEIN-RELATED 259 437 - -
Psa6g1763 437 PANTHER F16F4.11 PROTEIN-RELATED 10 255 - -
Psa6g1763 437 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 10 255 - -
Psa6g1763 437 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 259 437 - -
Psa6g1763 437 MobiDBLite consensus disorder prediction 290 316 - -
Psa6g1763 437 Gene3D - 131 206 - -
Psa6g1763 437 Pfam Myb/SANT-like DNA-binding domain 128 221 IPR044822 -
Psa6g1763 437 MobiDBLite consensus disorder prediction 55 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1763 Psa-Chr6 102628634 102630876 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa6g1763 Myb_DNA-bind_4 2.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1763 - - gmx:100808934 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0856 3 77462444 77464909 Psa6g1763 6 102628634 102630876 PCT