Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1755 ATGGAAACGGTAACTGAGTGTCACGATTCAGAAAACGAAAATTGCAAGCTGCAGCGGCGGCGGCGAGGCGAGTTGGTCGTGAACGGTTACTTCGTTTACACACGACGCAAGAGGATCGAGCATCATTCCGACAACGAGATAGTTAAAAGACTCAGAACCGAAGAAAACGAACAAGTTAAAGCGGAAATTGACTCCGGTGTGGCGGAGAAGAACGCTGTCGTTTTATGGACTTCTAAACGGCAGCGGCGACCTTCGTTTAAGCTTAAGGCTGATTCACAAGAAGATGCTTCTGCTGATAAGGCCACTGCTGTTCTTAATACGAAAAGCGTCGTGGCTAACGAGAAGCTGATGACTGTGAAGGAGCTCTTCGATACTGGTTTGCTCGATGGTGTTCCAGTTGTTTACGTTGGTTGCAAGAAGGAGGCTTCAGATTCGGGGTTGCAGGGTGTAATTGCTGGTGGAGGAATATTATGCTCGTGCTGTCTGTGCAATGGACGCAGAATTATTCCTCCTTCCAAATTTGAGATTCATGCCTGCAAAATATATAAGAGAGCCACGCAGTATATTTGCTTTGAAAATGGGAAGAGTCTGCTTGAACTGTTGGGAGTATGCAGGACTGCTCCCTTACATACTTTGGAGGCCACCATTCAAAATTTTCTTTGTATACCGCCTGAAGAGAAGTATTTTACTTGCAGAAGCTGCAGAGGTTGTTTCCCTGTTTCAACTGTGAAAAGAGTGGGGCTTATATGCCATTCTTGCGTGGAAACAAGCAAGTCTGAAGATGGCTCTATTCGTGCAGTTGGCAAAAGAGTCAGGACTCCTCGACCATATCTGTTCTCTAGTCCATCTAGTATTTCTGAAACGAGTATTTCTTCACAAACTAAGAGACAACAGAAGAAGAAAACAAAGTCATCAAAACGGGTTAGCATGACAAAATCTTCTAAGAAGAGTGCTTCTATGCCTATTATCCAGAAGAAAAGTTTGTGCAGCATGGAAACAAAGTCATCAAAACTGTTAGTCAAGTTTAAGATTGCTCCAATTACTTCAAATTCAAAATGTTCATCTCCCCAAAATAAGAGTCAGTGGAGGATCAATAAAAAGCATCAGCGATTGCATAAATTAATTTTTGAAGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGAGGGTATCAAAAAGAAATCCGGAATTATTTGTCGATGCTGCAACACTGAGATCAGCCCCGCACAGTTTGAAATTCATGCAGGGTGGGCTTCTCGCAGGAAGCCTTATGCATACATCTACACGTCGAACGGGGTGTCTCTCCATGAGTTGGCATTATTCCTCTCGAAAGATCGCAAATGCACTGCAAAGTATAATGATGATGCATGCATTGTTTGTTGGGACGGTGGAAATCTGTTGCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACGTCGTGGTCGGTACTGTCCAATCTGTCAACACATGTTCCTTGGAGAAGGATCTGCGGCTCTCAATCCTGATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATAGAACAGATTGCCAAGAGATGCATTCGGATAGTGAAAGATATTGAAGCTGAAATTGGTGGATGTGCTTTATGCAGGGGTTCTGACTTCAGCAAATCAGGATTTGGTCCACGCACAATAATAATATGTGATCAGTGTGAAAAGGAATATCACGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAATTGCCGGAAGGGGACTGGCTTTGTTGCAATGATTGCACAAGAATGCATTCTATTTTAGGGAACCTTCTAGTTAGGGTGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGAAATATATTTGGAACCCCTTAATGAGATTGATATAAGATGGAGGCTTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCGTTGCTTTTAGAGGCCTTGTCAATATTTAACGAATGTTTTGATCCTATAGTTGATGTAGCTACTGAACGGGACCTTATTCCTTCTATGGTTTATGGACGGAGTTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTAATTGTCAATTCATCTGTGGTATCTGCGGGCATGCTTCGGATATTTGGGAGAGATATTGCAGAGCTTCCTTTAATTGCTACAAGACACAAAAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCGTGCATTGAAAGGCTGCTGGCCTTCTTGAATGTGAAGAACCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCCATATGGATAAATAAATTTGGGTTTAGCAGGATGAAACTTGAGCAGCTTACCAACTATAGAAAGAACTGCCAACAGATGATGGCATTCAAAGGAACAGTTATGCTTCATAAAACAGTACCTCAATGTCGGGTAATCAATCGTGAGAAATGA 2496 0.4279 METVTECHDSENENCKLQRRRRGELVVNGYFVYTRRKRIEHHSDNEIVKRLRTEENEQVKAEIDSGVAEKNAVVLWTSKRQRRPSFKLKADSQEDASADKATAVLNTKSVVANEKLMTVKELFDTGLLDGVPVVYVGCKKEASDSGLQGVIAGGGILCSCCLCNGRRIIPPSKFEIHACKIYKRATQYICFENGKSLLELLGVCRTAPLHTLEATIQNFLCIPPEEKYFTCRSCRGCFPVSTVKRVGLICHSCVETSKSEDGSIRAVGKRVRTPRPYLFSSPSSISETSISSQTKRQQKKKTKSSKRVSMTKSSKKSASMPIIQKKSLCSMETKSSKLLVKFKIAPITSNSKCSSPQNKSQWRINKKHQRLHKLIFEEDGLPDGAEVAYYARGQKLLEGIKKKSGIICRCCNTEISPAQFEIHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKCTAKYNDDACIVCWDGGNLLLCDGCPRAFHKECASVSSTPRRGRYCPICQHMFLGEGSAALNPDAVAAGRVEGVDPIEQIAKRCIRIVKDIEAEIGGCALCRGSDFSKSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRMHSILGNLLVRVAERLPESLLDVIKKKQEEIYLEPLNEIDIRWRLVNGKVASPETRPLLLEALSIFNECFDPIVDVATERDLIPSMVYGRSLQTQDFGGMYCALLIVNSSVVSAGMLRIFGRDIAELPLIATRHKNRGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWINKFGFSRMKLEQLTNYRKNCQQMMAFKGTVMLHKTVPQCRVINREK* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1755 831 Pfam Tify domain binding domain 149 201 IPR032308 -
Psa6g1755 831 Pfam Tify domain binding domain 402 448 IPR032308 -
Psa6g1755 831 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 41 827 - -
Psa6g1755 831 SUPERFAMILY FYVE/PHD zinc finger 461 507 IPR011011 -
Psa6g1755 831 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 673 797 IPR016181 -
Psa6g1755 831 MobiDBLite consensus disorder prediction 296 310 - -
Psa6g1755 831 ProSiteProfiles Zinc finger PHD-type profile. 463 508 IPR019787 -
Psa6g1755 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 552 613 IPR013083 -
Psa6g1755 831 PANTHER AUTOIMMUNE REGULATOR 41 827 - -
Psa6g1755 831 MobiDBLite consensus disorder prediction 281 295 - -
Psa6g1755 831 SMART PHD_3 553 610 IPR001965 -
Psa6g1755 831 SMART PHD_3 465 506 IPR001965 -
Psa6g1755 831 Gene3D - 650 821 - -
Psa6g1755 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 452 535 IPR013083 -
Psa6g1755 831 SUPERFAMILY FYVE/PHD zinc finger 545 609 IPR011011 -
Psa6g1755 831 MobiDBLite consensus disorder prediction 281 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1755 Psa-Chr6 101622346 101632258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1755 105 829 PHD Transcription Factor Family AT2G36720 51.216 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1755 - - gmx:100816654 1141.33