Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1710 ATGGCATCTTGCGACGACGACGATGATTTCTCTATCCTCCGAGACGATAACCACCACTCTCACCATCTTCACCAAACCTTCGCACCACATCACCACCACCATCACCACCACCATTTCTCCACCGCATCAGTCCAATCAAAGCCCGTCGCCGACGATGATACCGATGATTACGGAAATCCGTTCGATGATGACGCCGGAAGCGAGAAACGTAAAGATCGAGATGAGATCGGTGACGGAACGACGTCGTACGGGTTTAACAAGAGGCCAAAACCGGCTTCTAGCGGAAACGGAGGAGTAGGAGGAGTAGGACTAGCAGGAGCAGAGTATAGGAAGGATCGAGAAGAATGGAGCGATACAGCGATTGTTTGCTTGCTAGAAGCTTATACTGAGAAGTTCACGCAACTGAATCGGGGGAATCTGAGGGGAAGAGATTGGGAGGAGGTAGCATCGGTGGTGAGTGAACGGTGTGAGAATCAATCGAAGAGTGTAGAGCAGTGTAAGAACAAGGTTGATAACCTGAAGAAACGGTATAAGCTGGAGAGACACAGAATGAACAATGGTTGCATTTCCGCCAGTCACTGGCCTTGGTTCAAGCAGATGGAAAACATCGTCGGAAATTCCCTCCCTTCCAAATTCGCAGACGAGGATAAAGCCATCGTTCCTGCTTCAAATTCTCCTAGGCAGTCCAAGAGATATGGAATGGCAACGTCCAACAGTGGAGGTCAAGTAAACAGCCTGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGAGTTGTTCTAAAAATTAGTGGATCAGCACTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGTGAAGTTGCAATTGCTTCCCGCCTTGGTGTCGAGATAGCAATTGTTGTCGGAGGTCGAAATTTCTTCTGTGGAGATGCATGGGTAACTGCTACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGGATGATGGCTACTGTGATGAATTCATTACTGCTCCAATCAACCCTCGAGAAGATGGGTGTTCAGACTCGTGTTCAAACTTCAGTTTCAATGCAGGAGTTTGCTGAACCATACAATAGGCAACGGGCCATCAGGCATCTTGAGAAAGGAAGAGTAGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACCGACATAGCTGCTGCTCTTCGAGCTTCAGAAGTTAATGCTCAGGCTGTCCTCAAAGCTACTAACGTAGATGGTGTATATGACTGCAACTCCCGAGACAATAATTTCACTTTCGAACACATATCCTTCAGGGAGCTAGTGTCTAGAGGTGTCACGTCTATGGATATGTCAGCCTTGACATTCTGTGAGGAAAATGCCATTCCAGTTGTAGTTTTTAATCTATTGGCACCTGGGAACATCTCAAAAGCTTTATGTGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1488 0.4644 MASCDDDDDFSILRDDNHHSHHLHQTFAPHHHHHHHHHFSTASVQSKPVADDDTDDYGNPFDDDAGSEKRKDRDEIGDGTTSYGFNKRPKPASSGNGGVGGVGLAGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISASHWPWFKQMENIVGNSLPSKFADEDKAIVPASNSPRQSKRYGMATSNSGGQVNSLKSKALSNLRWRRVVLKISGSALTGSDTCNIDPKVAMLVSSEVAIASRLGVEIAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSTLEKMGVQTRVQTSVSMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIAAALRASEVNAQAVLKATNVDGVYDCNSRDNNFTFEHISFRELVSRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQTGAIS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1710 495 MobiDBLite consensus disorder prediction 26 41 - -
Psa6g1710 495 CDD AAK_UMPK-PyrH-Ec 257 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Psa6g1710 495 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 63 495 IPR011817 GO:0006221|GO:0009041
Psa6g1710 495 Gene3D - 251 489 IPR036393 -
Psa6g1710 495 Pfam Myb/SANT-like DNA-binding domain 113 203 IPR044822 -
Psa6g1710 495 MobiDBLite consensus disorder prediction 62 78 - -
Psa6g1710 495 Pfam Amino acid kinase family 258 468 IPR001048 -
Psa6g1710 495 Coils Coil 156 183 - -
Psa6g1710 495 PANTHER URIDYLATE KINASE 63 495 - -
Psa6g1710 495 Hamap Uridylate kinase [pyrH]. 254 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Psa6g1710 495 MobiDBLite consensus disorder prediction 26 99 - -
Psa6g1710 495 Gene3D - 116 179 - -
Psa6g1710 495 SUPERFAMILY Carbamate kinase-like 255 488 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1710 Psa-Chr6 95865370 95870153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1710 116 207 Trihelix Transcription Factor Family AT3G14180 38.298 2.28e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa6g1710 AA_kinase 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1710 - - gmx:100805176 803.512