Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1709 ATGATGATGAACTCTATCATCATGTTCTTCTTCTTCTTCCTCTTTCTCACCATCTACATTGTGCCATGTTTAACATACAATGACACACATTCACTTACTCTCTTCCGTCAACAAGCCGACACACACGGCCAACTCCTCGCCAACTGGACCGGACACGACGCATGCTCGGCTGCATGGCACGGTGTCATTTGCTCCCCGAACAACCGTGTCACCACCCTCACACTTCATTCCCTCAACCTCCGAGGACCCATCGACGCTCTCTCTCCCCTAACCCATCTTCGCCTCCTCGACCTTCATAATAACCGTCTAAACGGTAACGTTTCAGCTTCTCTCCTCTCCAACTGCACCAATCTTAAACTCCTCTACCTCGCCGGAAACGACTTCTCCGGTCAAATCCCATCTGAAATCTCCTCCCTAGTTAACCTCCTCCGTCTCGACCTCTCTGATAACAACCTTGCAGGCGAAATACCCGAGGGAATCTCCCGTTTGACTAACCTCCTCACTCTAAGGCTTCAGAACAACGCACTCTCGGGTAACATCCCGGATATCTCCTCCGCCATGCCGAATCTCACAGAGCTCAACATGACCAACAACGAATTCTACGGCAACATACCAAACTCAATGCTAAAAAGATTCAGTGATGAAAGCTTCTCGGGTAACGAAGGTTTATGTGGTTCAAAACCGTTTCAAGTTTGCTCCTCCACGGAGAAAAACCCTCCGTCATCTGAACCGGTTCAGACCGTTCCTTCAAACCCGAGTACGTTCCCAGAAACAAGCGTTATCGCAAGACCAAGAAGCCAACACCGTAAAGGGTTAAGCCCTGGCGCAATTGTAGCCATTGTGGTAGCAAATTGTGTTGCATTGTTAGTGGTAACATCGTTTGTTGTTGCTCACTGTTGTGCTAAAGGGAGAGGTGTTAACAGTAATTCCATAGTGGGTAGTGAGGGTGGAAATGGGAATGGAAAGAGGAAAAGTTATGGTAGTGAGAAGAAGGTGTATAATGCAAATGGTGGGGGTGGTGATAGTAGTGATGGGACTAGTGGAACTGATATGAGTAAGCTTGTGTTTTTCGATAGGAGGAATGGGTTTGAATTGGAGGATCTGTTACGTGCTTCTGCTGAGATGCTTGGGAAGGGTAGTTTAGGAACTGTTTATAGGGCAGTGCTTGATGATGGTAGTACAGTTGCTGTTAAGAGGTTGAAAGATGCAAATCCATGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAACATCCTAATATTGTTAAACTAAGAGCTTATTATTATGCCAAGGAAGAAAAACTTCTTGTCTATGATTATCTCTCCAATGGAAGTTTGCATGCTCTTCTTCATGGGAACCGTGGGCCGGGGAGGATTCCGTTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGAGCGGCAAGAGGGCTTGCTAGGATTCATACAGAGTATAGTGCAGCAAAAGTGCCTCACGGGAATGTGAAATCATCCAATGTACTACTTGACAAGAACGGTGTTGCTTGCATTTCTGATTTTGGACTATCACTGCTGTTGAACCCTGTTCACGCAATTGCAAGACTGGGAGGGTACAGAGCACCTGAACAAACAGAACAAAAGAGACTGTCTCAGCAAGCTGATGTTTACAGTTTTGGAGTGTTGCTGTTGGAAGTTCTCACAGGGAGAGCACCTTCTTCACAGTACCCGTCCCCCGGGACTCGTCATCGTAAAGATGAAGAAGAAGAAAATGTGGTGGATTTGCCCAAATGGGTTAGATCAGTTGTGAGGGAAGAGTGGACTGGAGAGGTTTTTGATCAAGAACTTCTGAGGTATAAGAATATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGTTTAGCTTGTGTGGTGCAGCAGGCAGAGAAGAGGCCAACTATGGTAGATGTTGTTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTTTGTGCGAGGACTACGATGAATCGCGCAATTCACTTTCACCTTCGATTCCCACCACTGAAGATGGTCTTGTTTAG 2052 0.463 MMMNSIIMFFFFFLFLTIYIVPCLTYNDTHSLTLFRQQADTHGQLLANWTGHDACSAAWHGVICSPNNRVTTLTLHSLNLRGPIDALSPLTHLRLLDLHNNRLNGNVSASLLSNCTNLKLLYLAGNDFSGQIPSEISSLVNLLRLDLSDNNLAGEIPEGISRLTNLLTLRLQNNALSGNIPDISSAMPNLTELNMTNNEFYGNIPNSMLKRFSDESFSGNEGLCGSKPFQVCSSTEKNPPSSEPVQTVPSNPSTFPETSVIARPRSQHRKGLSPGAIVAIVVANCVALLVVTSFVVAHCCAKGRGVNSNSIVGSEGGNGNGKRKSYGSEKKVYNANGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQTEQKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPGTRHRKDEEEENVVDLPKWVRSVVREEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVQQAEKRPTMVDVVKMIEDIRVEQSPLCEDYDESRNSLSPSIPTTEDGLV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1709 683 MobiDBLite consensus disorder prediction 661 683 - -
Psa6g1709 683 Gene3D Transferase(Phosphotransferase) domain 1 446 671 - -
Psa6g1709 683 Gene3D Phosphorylase Kinase; domain 1 347 445 - -
Psa6g1709 683 Gene3D Ribonuclease Inhibitor 23 221 IPR032675 -
Psa6g1709 683 ProSiteProfiles Protein kinase domain profile. 370 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1709 683 MobiDBLite consensus disorder prediction 234 267 - -
Psa6g1709 683 Pfam Protein kinase domain 374 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1709 683 PANTHER LRR RECEPTOR-LIKE KINASE 14 674 - -
Psa6g1709 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 674 - -
Psa6g1709 683 SUPERFAMILY Protein kinase-like (PK-like) 374 650 IPR011009 -
Psa6g1709 683 MobiDBLite consensus disorder prediction 234 261 - -
Psa6g1709 683 SMART LRR_typ_2 139 163 IPR003591 -
Psa6g1709 683 SMART LRR_typ_2 90 114 IPR003591 -
Psa6g1709 683 SMART LRR_typ_2 187 211 IPR003591 -
Psa6g1709 683 SUPERFAMILY L domain-like 26 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1709 Psa-Chr6 95861993 95864982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1709 24 679 Receptor kinase-like Gene Family AT2G36570 66.069 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa6g1709 Pkinase 4.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1709 - - gmx:102660494 974.541