Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1695 ATGTTTGAGACAGAAGATCATTCCAAATTAAAAAACATTGAATTCAACACTTCATTTCCAATAACACAAACAATATCAAGTTCAACAAATTACATACACCAGTTTTCATCATCAACATCAACGGTAACAAACTTAGCAATGGCGAAAAACTGCTTCGACCTCAAAACAATGACGTATTACTCACCAAGACAACCCATTCATCTTCCCACCGATCCCAATCTCTCCCTAACCTCCTTCCTCTTCCAGTCCACTTCCTCCGTCGCCGACAACATCGCCCTCGCCGACGCCCAAACCGGTGACTCCCTAACCTTCCGTCAACTTAAAGCCCAAGTCACCGCTCTCTCCCGCTCCTTACTCCGCCTCGGCATCCAACAAGGCGACGTCATTTTGCTATTCGCACCTAACTCCATACGTTTCCCTGTCTGCTTCTTAGCTATAGTTTCCATAGGTGCTATTGCCACCACCTGCAGTCCTTTATACACCGTCTCCGAACTTTCCAAGCAAATCCAAGACTCCAATCCCAAAATCGTCGTTACCATATCAGCACTTCTACACAAAATCGAACCATTACCTTTCGATATACCTTCAATATTGCTTGACGATGCTTCAACCAGAGTACTTTCCTCGAAAATATTCAGTTCTCGGGTTTGGGACTTCAAGGATCTTACCGGAGAGTCAAACAAGAGCCCCGACGAGATTCTGGCAAAGGGTGTTGTTTCGCAATCCGACGTTGCGGTGATTCTATACTCTTCAGGAACCACCGGAAGAAGTAAGGGAGTGATGCTGACTCACCGAAACTTCATAGCAGCAGCGTTGGCGGGAGTGGCGGATCAGGAACACTACCGTGAGGGGAAGAATGTGTTCTTATGTTTGGCGCCAATGCATCACGTGTTGGGATTGGGAATGATAACGTACACGCAGCTGAGGAGAGGGAATATGGTTGTATCAATAGATAGATTTGAACTGGAGAAGACTATGGCAACGATCCAAAAGTTTAGGGTAACACATTTGTACGTTGCTCCGCCGGTGATGATGGAGCTGATCAGGCGGCGTAATGTTGTGAGCAGTTATGACTTGTCTTCGCTGAAACAACTTGCCGGTGGCGCTGCTCCTTTGGGGAAAGATGTGATGCAAGAGTGTGCTAAGATTCTGCCCCAAGTTGAAATCATTCAGGGGTATGGCATGACGGAAGCATGTGGACTTATTTCCTATGAAAATCCAAACGACAAATGGTTCGTTTCTGGTTTAGGTTCAACTGGAACACTAGTTCCAAATGTAGAATCCCGAATTGTTAGTTTGGAAACTTTTAAGCCTCTTCCACCCAATCAATTAGGTGAAATTTGGTTTAGAGGACCTATTATGATGAAAGGATACTTTAACAATCCAGAAGCAACAAAACAGACGATTAATGATGAGGGTTGGTTGATTACGGGAGATCTTGGATATTTTGATGAAAAGGGACAGCTATTTGTTGTGGATAGAATAAAAGAGCTTATCAAGTGTAGCGGATATCAAGTAGCGCCCGCTGAGCTTGAAGACTTACTGGTTTCTCACCCTGAAATTTCTGATGCTGGGGTTATCCCATCCCCTGATGCCAAAGCTGGTGAGGTTCCGGTGGCTTTTGTTGTTCGCTCACCCAACAGCTCGATAACTGAAGAGGACATTCTGAAGTTTGTTGCAAAACAGGTTGCACCATACAAAAGGTTGCGGCGAGTGACTTTTATAGAGAGAATTCCAAAGTCACCCACCGGAAAGATCTTAAGAAAGGATCTTGTAATTTTGGATAGACAGAAGACATCAAAGTTATAG 1809 0.4461 MFETEDHSKLKNIEFNTSFPITQTISSSTNYIHQFSSSTSTVTNLAMAKNCFDLKTMTYYSPRQPIHLPTDPNLSLTSFLFQSTSSVADNIALADAQTGDSLTFRQLKAQVTALSRSLLRLGIQQGDVILLFAPNSIRFPVCFLAIVSIGAIATTCSPLYTVSELSKQIQDSNPKIVVTISALLHKIEPLPFDIPSILLDDASTRVLSSKIFSSRVWDFKDLTGESNKSPDEILAKGVVSQSDVAVILYSSGTTGRSKGVMLTHRNFIAAALAGVADQEHYREGKNVFLCLAPMHHVLGLGMITYTQLRRGNMVVSIDRFELEKTMATIQKFRVTHLYVAPPVMMELIRRRNVVSSYDLSSLKQLAGGAAPLGKDVMQECAKILPQVEIIQGYGMTEACGLISYENPNDKWFVSGLGSTGTLVPNVESRIVSLETFKPLPPNQLGEIWFRGPIMMKGYFNNPEATKQTINDEGWLITGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKAGEVPVAFVVRSPNSSITEEDILKFVAKQVAPYKRLRRVTFIERIPKSPTGKILRKDLVILDRQKTSKL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1695 602 Pfam AMP-binding enzyme 87 501 IPR000873 -
Psa6g1695 602 ProSitePatterns Putative AMP-binding domain signature. 247 258 IPR020845 -
Psa6g1695 602 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 51 597 - -
Psa6g1695 602 SUPERFAMILY Acetyl-CoA synthetase-like 62 593 - -
Psa6g1695 602 Pfam AMP-binding enzyme C-terminal domain 510 585 IPR025110 -
Psa6g1695 602 CDD 4CL 68 591 - -
Psa6g1695 602 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 51 597 - -
Psa6g1695 602 Gene3D - 59 496 IPR042099 -
Psa6g1695 602 Gene3D - 497 599 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1695 Psa-Chr6 94527789 94530539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1695 59 598 Monolignol Biosynthesis Gene Families AT4G05160 57.222 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1695 K01904 - qsu:112025709 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1695 6 94527789 94530539 Psa6g3961 6 343857362 343859581 ECH
Psa6g1695 6 94527789 94530539 Psa6g1695 6 94527789 94530539 ECH