Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1694 ATGGCGAAAAACTGCTTCGACCTCAAAACGATGACGTATTCCTCACCAAGACAACCCATCCATCTTCCCACCGATCCCAGTCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCCTCCATCTCCGACACCATCGCCCTCGCGGATGCTCAAACCGGCGACTCCCTAACCTTCGGTCAACTTGAAACCCAAGTCACCGCCCTCTCCCGCTCCTTACTCCGCCTCGGTATCCAACGAGGCGACGTTGTTTTGCTATTCGCACCTAACTCCATTCGCCTCCCTGTCTGCTTTCTAGCTATAGTTTCCATAGGTGCTATTGCCACCACCTGTAGTCCTTTATACACAGTCTCCGAACTCTCCAACCAAATCAAAGACTCCAATCCCATACTCGTCGTTACCGTATTGGAACTTCTATATAAAATCGAACAATTGCCCTTTGATTTACATTTACCTTCAATATTGCTTGATGATGCTTCAAGCGGAATATTTTCCTCAACTATATTCAGTTCTTTGGTTTGGGACTACGAGGATCTTATCGGAGAGTCAAACGAAAGCTCCGACCAGTTTCCAGCAAACGGTATCGTTTTACAATCAGACGTGGCGGTGATTCTGTACTCTTCAGGAACCACAGGGAGAAGTAAGGGAGTAATGCTGACTCACCGGAACTTCATAGCCACGGCAGTCGCAGGAACTGCGGATCAGGATTTTTACTGTGAGGGGAAGAATGTGTTCTTATGTTTGGTGCCAATGCACCATGTGATGGGATTGGCAGTGATAACGTACACGCAGCTGCGGAGAGGGAATACCGTGGTGATAATGAGTAAATTTGAACTGGAGAAGACTTTGGCGGCTGTGGAGAAGTTTAGGGTGACGCATTTGTATGTTGCTCCACCGGTGATGGTGGAGCTGGTCAAGCGGCGTCACGTAGACGGTTACGACTTGTCGTCGCTTAAACAACTTGCAGGTGGTGCTGCTCCTTTAGGGAAAGATTTGATGCAAGAGTGTGCTAAGATTCTACCCCAAATTGAAATCATTCAGGGGTATGGCATGACTGAATCATGTGGACTTATTTCTATGGAAAATCCAAAGGAAGAGTGGTTCCTTTCTGGTTTAGGTTCAACTGGAACGCTGCTTCCAAGTATAGAATCTCGAATTGTTAGTTTAGAAACATCTAAACCCCTACCACCAAATCAAGTAGGAGAGATTTGGTTACGAGGATCTACTATGATGAAAGGATACTTTAACAATCCAGAAGCAACAAAACAGACTATTAATGATGAGGGTTGGATGATTACCGGAGATCTTGGATATTTTGACGAAAAGGGACAACTATTCGTTGTGGATCGTATAAAAGAGCTCATCAAATGTAGCGGGTATCAAGTGGCTCCAGCTGAACTTGAAGACTTATTAGTTTCTCATCCTGAAATTTCTGATGCTGGGGTGATCCCATCCCCTGATGCCAAAGCTGGTGAGGTTCCGGTGGCTTTCGTTGTTCGCTCACCCAATAGCTCGATAACCAAAGACGACATTCTGAAATTTGTAGCAAAACATGTTGCCCCATACAAAAGGTTGCGGCGAGTGACTTTTATAGACAAGATTCCAAAGTTACCCACTGGAAAGATCTTAAGAAAGGATCTTGTAATTTTGGATAGACAGAAGACATCGAAGTTGTAG 1674 0.454 MAKNCFDLKTMTYSSPRQPIHLPTDPSLSLTSFLFQSTSSISDTIALADAQTGDSLTFGQLETQVTALSRSLLRLGIQRGDVVLLFAPNSIRLPVCFLAIVSIGAIATTCSPLYTVSELSNQIKDSNPILVVTVLELLYKIEQLPFDLHLPSILLDDASSGIFSSTIFSSLVWDYEDLIGESNESSDQFPANGIVLQSDVAVILYSSGTTGRSKGVMLTHRNFIATAVAGTADQDFYCEGKNVFLCLVPMHHVMGLAVITYTQLRRGNTVVIMSKFELEKTLAAVEKFRVTHLYVAPPVMVELVKRRHVDGYDLSSLKQLAGGAAPLGKDLMQECAKILPQIEIIQGYGMTESCGLISMENPKEEWFLSGLGSTGTLLPSIESRIVSLETSKPLPPNQVGEIWLRGSTMMKGYFNNPEATKQTINDEGWMITGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKAGEVPVAFVVRSPNSSITKDDILKFVAKHVAPYKRLRRVTFIDKIPKLPTGKILRKDLVILDRQKTSKL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1694 557 Pfam AMP-binding enzyme 42 456 IPR000873 -
Psa6g1694 557 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Psa6g1694 557 Gene3D - 452 554 IPR045851 -
Psa6g1694 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 552 - -
Psa6g1694 557 Gene3D - 12 451 IPR042099 -
Psa6g1694 557 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 552 - -
Psa6g1694 557 SUPERFAMILY Acetyl-CoA synthetase-like 25 547 - -
Psa6g1694 557 CDD 4CL 22 546 - -
Psa6g1694 557 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1694 Psa-Chr6 94374527 94377433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1694 13 553 Monolignol Biosynthesis Gene Families AT4G05160 56.747 0.0 601