Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1691 ATGGCGAAAAATTGCTTCGACCTCAAAACGATGACGTATTCCTCACCAAGACAACCCATCCATCTTCCCACCGATCCCAATCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCCTCCGTCTCCGACACCATCTCCCTCACGGATGCTCTAACCGGCGACTTCCTAACCTTCCGTCAACTTGAAACCCAAGTCACCACCCTCTCCCATTCCTTACTCCGCCTCGGCATCCAACGAGGCGACGTCGTTTTGCTATTCGCACCTAACTCTATACGCTTCCCTGTCTGCTTCTTAGCTGTAGTTTCCATAGGTGCTATTGCCACTACCTGTAGTCCTTTATACACCGTCTCCGAACTCTCCAACCAAATCCATGACTCCAATCCAAAAATTATCGTAACTGTATCAGAACTTCTACACAAAATCGAACAATTACATTTGAATTTACCTTTAATATTGCTTGACGATGCTTCAACCAGAGTATCATCCTCCAAAATATCCAGTTCTTTGATTCAGAACTACGAGGATCTTACCAGAGAGTCAAACAAGAGCTGCGACGAGATTCATGCAAACGGCGTCGTTTCGCAATCCGACGTGGCGGTGATCCTATACTCTTCAGGAACCACCGGAAGAAGTAAGGGAGTGATGTTGACTCATCGAAACTTCATAGCGACGACCTTGGCAGGAGCAGCGGATCAGGATTATTACGGCGAAGGGAAGAATGTGGCCTTATGTTTGGTGCCAATGCATCACATGATGGGATTGGCCGTGATAACGTACACGCATCTGCGGAGAGGGAATACGGTGGTGTCGATGGTTAGATTTAAACTAGAGAAGACTTTGGCGGTTGTGGAGAAGTTTAGCGTGACGCATTTGTCTATTGCCCCACCGGGGTATGGCTTGACGGAAGCATGTGGACTTGTTTCCGTAGAAAATTTAAGGGAAGAATGGTTCCTTTGTGGTTTAGGTCCAAGTGGAGCACTGCTTCCAAGTGTAGAATCTCAAATTGTTAGTTTAGAAACATCGAAGACACTACCACCGAATCAAGTAGGAGAGATTTGGTTACGAGGACCTACTATGATGAAAGGATATTTCAACAACCCAGAAGCAACAAAGCACACGATTAATGATGAGGGATGGATGATTACAGGAGATCTTGGATATTTTGATGAAAAAGGACAATTATTTGTTGTAGACCGTATAAAAGAGCTTATTAAGTGTAACGGATATCAAGTGGCACCAGCTGAACTCGAAGACTTGCTCGTTACTCATCCTGAAATTTCGGAGGCTGGAGTGATTCCCGTGACGCATTTGTCTATTGCCCCACCGGTGATGGTAGAGCTGGTTAAACAGCGTCAAGTTTTGAGCCGTTATGACTTGTCGTCCCTGAAAAGACTAGCCTGTGGTGCTGCTCCTTTGGGAAAAGATGTGATGCAGGAGTGTGCTAAAATTCTACCTCAAGCTAATATCGTTCAGGGGTATGGCTTGACCGAAGCATGTGGACTTGTTTCCGTAGAAAATTTAAGGGAAGAATGGTTCCTTTGTGGTTTAGGTTCAAGTGGAGCACTGCTTCCAAGTGTAGAATCCCATATTATTAGTTTAGAAACATCGAAGACACTACCACCGAATCAAGTAGGAGAGATTTGGTTACGAGGACCTACTATGATGAAAGGATATTTCAACAACCCAGAAGCAACAAAGCACACGATTAATGATGAGGGATGGATGATTACAGGAGATCTTGGATATTTTGATGAAAAAGGACAGTTATTTGTTGTAGACCGTATAAAAGAGCTTATTAAGTGTAATGGATATCAAGTGGCACCAACTGAACTCGAAGACTTGCCCGTTACTCATCCTGAAATTTCTGAAGCTGGAGTGATTCCATCTCGCGATGCCAATGTTGGCGAGGTTCCCGTGGCCTTTGTTGTTAGATCTCCTAATAGCTCGATAACTGAAGAAGACATTAAGAAATTTGTTGCGAAACAGGTTGCACCTTACAAAAGGTTGCGGCGAGTGACTTTTATAGAGAAAATGCCAAAGTCAGTCATAGGAAAGATTTTAAGAAAGGATCTAGTAAGTTTAGATCAACAAAAGACATCAAAACTATAG 2109 0.4395 MAKNCFDLKTMTYSSPRQPIHLPTDPNLSLTSFLFQSTSSVSDTISLTDALTGDFLTFRQLETQVTTLSHSLLRLGIQRGDVVLLFAPNSIRFPVCFLAVVSIGAIATTCSPLYTVSELSNQIHDSNPKIIVTVSELLHKIEQLHLNLPLILLDDASTRVSSSKISSSLIQNYEDLTRESNKSCDEIHANGVVSQSDVAVILYSSGTTGRSKGVMLTHRNFIATTLAGAADQDYYGEGKNVALCLVPMHHMMGLAVITYTHLRRGNTVVSMVRFKLEKTLAVVEKFSVTHLSIAPPGYGLTEACGLVSVENLREEWFLCGLGPSGALLPSVESQIVSLETSKTLPPNQVGEIWLRGPTMMKGYFNNPEATKHTINDEGWMITGDLGYFDEKGQLFVVDRIKELIKCNGYQVAPAELEDLLVTHPEISEAGVIPVTHLSIAPPVMVELVKQRQVLSRYDLSSLKRLACGAAPLGKDVMQECAKILPQANIVQGYGLTEACGLVSVENLREEWFLCGLGSSGALLPSVESHIISLETSKTLPPNQVGEIWLRGPTMMKGYFNNPEATKHTINDEGWMITGDLGYFDEKGQLFVVDRIKELIKCNGYQVAPTELEDLPVTHPEISEAGVIPSRDANVGEVPVAFVVRSPNSSITEEDIKKFVAKQVAPYKRLRRVTFIEKMPKSVIGKILRKDLVSLDQQKTSKL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1691 702 SUPERFAMILY Acetyl-CoA synthetase-like 434 696 - -
Psa6g1691 702 Pfam AMP-binding enzyme 433 601 IPR000873 -
Psa6g1691 702 Pfam AMP-binding enzyme 297 406 IPR000873 -
Psa6g1691 702 Pfam AMP-binding enzyme 52 295 IPR000873 -
Psa6g1691 702 Gene3D - 597 701 IPR045851 -
Psa6g1691 702 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Psa6g1691 702 SUPERFAMILY Acetyl-CoA synthetase-like 23 436 - -
Psa6g1691 702 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 297 433 - -
Psa6g1691 702 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 296 - -
Psa6g1691 702 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 434 697 - -
Psa6g1691 702 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 434 697 - -
Psa6g1691 702 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 297 433 - -
Psa6g1691 702 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 296 - -
Psa6g1691 702 Pfam AMP-binding enzyme C-terminal domain 610 685 IPR025110 -
Psa6g1691 702 Gene3D - 425 596 IPR042099 -
Psa6g1691 702 Gene3D - 12 296 IPR042099 -
Psa6g1691 702 Gene3D - 297 402 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1691 Psa-Chr6 94327723 94338609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1691 434 702 Monolignol Biosynthesis Gene Families AT4G05160 61.710 4.25e-109 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1691 K01904 - jre:108982339 481.1