Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1677 ATGCTTAGTTCTTTTGTTGGGAAGGTACAAAAGAGTTTATCACTGTTTGTACCAAGAAAGCATGCATTGAGTTACTGGAATGAAGATCATGCCACAACCACAACTGAATTGGCTGATGATGTTATGGAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGATGAAACAAGAAGGTTTATAGTTGGGTTAGATTACCTGACTGATCCAGCTTTTGTGGGATTGCTTGACGAAGCTTGGGAGGAGTATGGTTTCAGACAGAAGGGAACTCTTGTTGTTCCGTGCACGCCGATGAAGTTGCAGAACATTCTAGATGGTCGGAAAACATAG 327 0.422 MLSSFVGKVQKSLSLFVPRKHALSYWNEDHATTTTELADDVMEGYFAVLARKGDETRRFIVGLDYLTDPAFVGLLDEAWEEYGFRQKGTLVVPCTPMKLQNILDGRKT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1677 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Psa6g1677 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 107 - -
Psa6g1677 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1677 Psa-Chr6 93349775 93351197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1677 27 94 Calmodulin-binding Proteins AT3G43120 41.176 2.66e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1677 - K14488 gmx:100818734 140.198