Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1666 ATGGAGGGAGTTACCAGCAATGGCCACGTTCAAGAAACTTTATGTTTGAGCAAAAATGGTGTTACTGTTGCTGGTGCTGGTGCTGGTGCTGATCCACTCAACTGGGGTGCGGCGGCGGAGTCGTTGATGGGGAGTCATTTGGATGAGGTGAAGCGTATGGTGGCGGAGTATCGTAAACCTATTGTTAAAATCGGTGGTGAGACTCTTACCATTGGTCAGGTGGCTGGAATTGCTTCTCATGATAGTGGTGTTCGGGTGGAGCTTTCAGAGTCGGCGAGGGCCGGCGTGAAGGCGAGTAGTGATTGGGTGATGGACAGCATGAACAAAGGGACGGACAGTTACGGTGTTACCACCGGTTTTGGTGCTACTTCTCACCGGAGAACCAAACAAGGTGGTGCCTTGCAGAAGGAGCTAATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAATCCAATTGTACATTACCACACACTGCAACAAGAGCTGCAATGCTTGTTAGAATCAACACTCTTCTTCAAGGCTACTCAGGAATCAGATTTGAAATCTTGGAAGCAATCACAAAGCTTCTTAACAACAACATCACTCCATGTTTACCGCTTCGTGGAACAATCACGGCTTCTGGTGATCTTGTTCCACTTTCATACATTGCTGGTTTATTAACCGGGAGGCCGAACTCGAAAGCCGTTGGACCCTCTGGTGAAATTCTTAATGCTAAAGAAGCTTTTCAGCTTGCAAATATTGGTTCTGAGTTCTTTGAATTGCAGCCAAAAGAAGGTCTTGCTCTTGTTAACGGAACCGCTGTTGGTTCTGGTTTGGCTTCTATTGTTCTGTTTGAAGCAAATGTGTTGGCTGTTTTGTCTGAAGTTATGTCGGCGATTTTCGCGGAAGTTATGCAAGGAAAACCGGAATTTACCGATCATTTGACTCATAAGTTGAAGCATCATCCTGGTCAGATTGAAGCTGCTGCTATTATGGAACATATTCTGGATGGAAGTGCTTATGTTAAAGCAGATAAGAAGTTACATGAGATGGATCCATTGCAAAAGCCGAAACAAGATCGTTACGCGCTTAGAACTTCACCACAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCAACCAAGTCAATTGAAAGAGAGATTAACTCCGTCAACGACAATCCTTTGATCGATGTTTCGAGGAACAAGGCCTTACACGGTGGTAACTTTCAAGGAACTCCTATTGGAGTTTCCATGGATAACACGCGTTTAGCTCTTGCTTCAATCGGTAAACTCATGTTCGCGCAATTCTCTGAGCTTGTTAACGATTTTTACAACAACGGTTTGCCTTCAAATCTTTCTGGAGGTAGGAATCCAAGTTTGGATTACGGTTTCAAAGGCTCTGAAATTGCTATGGCTTCTTATTGTTCCGAGATACAATATCTTGCTAACCCTGTCACCACTCATGTCCAAAGTGCTGAGCAGCATAACCAAGATGTTAACTCTCTCGGTTTGATTTCTTCGAGAAAAACAAACGAGGCTATCGAGATTCTAAAGCTCATGTCTTCAACTTACCTGGTCGCGCTTTGTCAAGCAATTGACTTAAGGCATTTGGAGGAGAATCTGAGAAATGCTGTGAAAAACACTGTGAGTCAAGTTGCTAAGAGAACACTCACAACCGGTGTCAACGGAGAGCTTCATCCTTCTAGATTCTGCGAGAAAGATTTGCTCAAAGTTGTCGACAGAGAGTACGTATTCGCCTATGCTGACGATCCTTGTCTAGCTACATACCCTTTGATGCAAAAGTTGAGGCAAGTGCTTGTGGATCATGCGTTGGTGAATGTGGAAGGTGAGAAGAATTCGAACACATCGATTTTTCAGAAGATTGCAACTTTTGAAGACGAGTTGAAGGCTCTCTTACCGAAAGAAGTTGAAAATGTACGAGCTGCATACGAAAACGGACAAAGTGGAATCCCAAACAAGATCAAGGAATGCAGGTCTTATCCATTGTACAAGTTTGTCAGAGAGGAGTTGGGGACCGCTTTGTTGACGGGCGAAAAGGCGATTTCCCCGGGCGAAGAGTGCGACAAAGTGTTCACAGCTATGTGTCAAGGATCAAACATATGTAGTTATAGTGACAGTAGTAAATCGTAG 2142 0.4402 MEGVTSNGHVQETLCLSKNGVTVAGAGAGADPLNWGAAAESLMGSHLDEVKRMVAEYRKPIVKIGGETLTIGQVAGIASHDSGVRVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQLANIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANVLAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGSEIAMASYCSEIQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADDPCLATYPLMQKLRQVLVDHALVNVEGEKNSNTSIFQKIATFEDELKALLPKEVENVRAAYENGQSGIPNKIKECRSYPLYKFVREELGTALLTGEKAISPGEECDKVFTAMCQGSNICSYSDSSKS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1666 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 31 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa6g1666 713 SUPERFAMILY L-aspartase-like 31 704 IPR008948 GO:0003824
Psa6g1666 713 Gene3D Fumarase/aspartase (Central domain) 269 703 - -
Psa6g1666 713 Gene3D - 535 656 IPR023144 -
Psa6g1666 713 Pfam Aromatic amino acid lyase 69 544 IPR001106 -
Psa6g1666 713 Gene3D - 23 268 IPR024083 -
Psa6g1666 713 CDD PAL-HAL 67 532 IPR001106 -
Psa6g1666 713 PANTHER HISTIDINE AMMONIA-LYASE 24 706 IPR001106 -
Psa6g1666 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 204 220 IPR022313 GO:0016841
Psa6g1666 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 24 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1666 Psa-Chr6 91598013 91602990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1666 31 704 Monolignol Biosynthesis Gene Families AT2G37040 83.680 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1666 K10775 - gmx:100302735 1231.47