Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1662 ATGACTTCACAATTAGCTATCCACACATTCTCTCAATCAGACACCAAAACAACTTCCACCGCCGTAACCACCACAGATTCCGATCCCAATCTGCAACTTTCCACCGTTCGCAGAACTTCCACCACCGCCTCTCGATCCACCAAAGACCGTCACACTAAGGTTAACGGCCGTGGTCGCCGCGTCCGTATGCCGCCTCTCTGCGCCGCAAGGATATTCCAGCTTACACGCGAACTCGGCCATCGTTCCGACGGTGAAACCATCGAGTGGCTCCTCCGACAGGCTGAGCCGTCTATTATCGCTGCCACCGGCACTGGCACTGTTCCTGCTGATCCAGTCTCGACTATCTTCCCGGTTTCTTCCTCATCTGTGCAGTCTGTGTCTTGCAATGTTCACCCGGTGTCTTCGGTTTGTCATGGTAGTCAAGACGTGTTTGCTGCGGGGATGCCGCTACAGCAGCCGAGCTGCCGGCTTGACCTCTGTCAGCCTATCGGAATGGAATACGCGGCGGAAAACAGATACCGTCATATGCCGTTCACCGCGTTGTTGTTGCAACCGACTACGGTGGAGGAGAATCAGCAAGAAGAAACTCTGAGCGAACAATGA 603 0.5439 MTSQLAIHTFSQSDTKTTSTAVTTTDSDPNLQLSTVRRTSTTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPADPVSTIFPVSSSSVQSVSCNVHPVSSVCHGSQDVFAAGMPLQQPSCRLDLCQPIGMEYAAENRYRHMPFTALLLQPTTVEENQQEETLSEQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1662 200 MobiDBLite consensus disorder prediction 1 56 - -
Psa6g1662 200 ProSiteProfiles TCP domain profile. 47 101 IPR017887 -
Psa6g1662 200 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 134 IPR005333 GO:0003700
Psa6g1662 200 Pfam TCP family transcription factor 46 140 IPR017887 -
Psa6g1662 200 MobiDBLite consensus disorder prediction 1 42 - -
Psa6g1662 200 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 23 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1662 Psa-Chr6 91274325 91275687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1662 47 187 TCP Transcription Factor Family AT2G37000 58.156 3.25e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa6g1662 TCP 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1662 - - cam:101510590 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1662 6 91274325 91275687 Psa6g1662 6 91274325 91275687 ECH