Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1657 ATGAGGAATTTTGTTTCCTACATTGCACTCTTTTTCCTTTTCTCTTTCACTCTTTTACCGAGAATTCATTGTGCCGAAGGAGCTTTTGCCCCGTCCTTTTACACCGATGAAATCTACAAGGAGCTTCAGAATATCGCTATTCTTTTGAATAAGGATATTAAATCAAGTTTAGGTTTCTGCATTAAGGATCCGAAAAAAGATTGGGAAGAAGCTTTTGATTTTACGGGAAAGTTGGATTTTGTTGAATCTTGTGTTAAGAAAAAAGGAGATTTCAGGGATCGTATATGTACTGCAGCTGAAATAAGGTACTACTTCCATGGTTTCTTGGTACAGGGAGCAGCTACTGACAATTATGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGGGTTGTAGTACGAGCACTGATATTGATCTAAAAAAAGACACAAAGGAAATTCCAAAGAGAACCAAAAACTGTAAACCTTGTTGTGAGGGTTTTTTCTGTCCTCAAGGATTGACTTGTATGATACCTTGCCCGCTAGGTTCTTATTGCCCGCTTGCAAAACTGAACAACCAGACTGGACTATGTGACCCATATAGTTATCAGATACCTCAGGGAGAACCAGATCATACTTGTGGCAGTGCTGATATTTGGACTGGTGTGGTGAACAATAGCGATATATTTTGTTCTCCCGGATCATACTGCCCAACAACAACACGTAAAGTTTCTTGTGATCGTGGATATTACTGCAGGATGGGTTCTACTCATCAGAATCCATGCTCCAGGTTCAGCCAATGTAATCCAAACACAACAAACCAAAATATGCATGCTTATGGCGCTCTGCTTATTGTTGCATTGAGTACTGTCTTGATCTTCATTTATAATTGTTCTGATCAAGTTCTAGCTACTCGAGAAAGAAGAAAAGCTAAATCCAGAGAAGCTGCAGCAAAACAGGTAAGAGAAACTGTACAAGCTAGAGAAAGGTGGAAGATAGCAAAAGATGCTGCTAAAATGAATAAGCCAGGATTGCAAGATCAGCTAGTCCGCACGTTTTCTCGCAGAAAATCAGCAAAGCATGGGGAGCAAGCTAATCCTGCTACAGGCAATTCAGTTTTGCCACCTATGCCTCCAGAACAACCATCTCCAGCCACAAAAGACCAATCAAAGGAACCTAGCAACCTTACTAAAATGTTGAATTCCCTTGAGAATGACCCTAATAGTAATGAAGGATTCAATCTAAAGATTGGGGACAAAAATATTAAAAAACAATTGCCTAAGGGAAAAAATTTACATACACAAAGCCAAATTTTAAGGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAACAAGACAAAAATAACTTGACCTTCTCAGGAGTGATTTCAATGGCCGCCGATGGTGAGGAGGTTAGATCGAGGCCTGCGATCGAGGTAGCTTTCAAAGATTTAACCCTTACTTTGAAAGGGAAAAGAAAACATGTAATGAGGTGTGTGACAGGTAAAATCATGCCTGGTCGTGTTTCAGCTGTGATGGGTCCTTCGGGAGCTGGAAAAACTACATTTCTTTCTGCTCTAGCAGGGAAAATAAGAGGATGCACTATGACAGGCTCAATTCTAATCAATGGAAGAGCTGAATCCATTCACTGTTACCAGAAAATTATTGGATATGTGCCGCAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGATGACCTGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGACTCCAGGGAATAAGAGATTCCGTCGTTGGAACAGTAGAGAGGCGAGGCATATCTGGTGGGCAACGAAAACGTGTAAATGTAGGGTTGGAGATGGTTATGGAGCCTTCATTATTAATCTTAGATGAGCCTACAACTGGTCTTGACAGTGCATCTTCCACTTTACTGCTGAAAGCACTTCGTCGTGAAGCTGCTGAAGGAGTAAACGTCTGCATGGTACTTCACCAACCGAGCTATACTTTGTTCAGAACGTTTGATGATATAATATTTCTAGCAAAAGGAGGTCTTACTGCATATCACGGTCCTGTAAAAAAAGTAGAAGAATACTTTGCTGGCATTGGAATCGTTGTTCCTGATCGCGTGAATCCTCCTGACCATTATATTGACATTTTGGAAGGTTTAGTGAAACCAAATGAAGGTGTGACTTATCAACAGCTACCTGTGAGATGGATGCTTCATAATGGTTACCCAGTACCACCAGATATGCTTCATTTTGCTGATGAAATTTCTGCTTCATCATCTTCCACAAATACAAATCATGTAACTAAGGGTACTGAGGAGGCTACTGATCAATCATTTGCGGGAGAGTTTTGGGAGGAAATGAAAAGTAATGTGCAGTTGCAAAAAGATCATATAGAGGCAACCTTCTTATCGATCAAGGATTTATCAAACCGAAGAACACCTGGTATAAGTCGCCAGTATAGATACTACCTTGGGCGGGTTGGTAAGCAGCAGCTCCGAGAAGCAAAGTCACAAGCAGTTGATTATCTCCTTTTATTAGTTGCTGGTGCTATCTTGGGAACTCTTACCAAAGTAAATGACGAAACATTTGGGTCTCTTGGATACACATATACTGTCATTGCTGTTTCTCTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTCTGGATAAATTACAATACTGGAGGGAGAGTGCATCCGGGATCAGCAGTCTAGCTCATTTTTTATCCAAAGATACAATTGATCTTTTCAGTACATTAGTCAAACCTCTTATTTATCTATCCATGTTTTACTTCTTTAGCAATCCAAGATCAACCTTCGGAAGTAATTACGCGGTTTTGGTGTGCCTTGTGTACTGTGTGACTGGCATGGCTTACGCATTAGCAATTTATTTCGAGCCTGCTCCTGCTCAGCTGTGGTCAGTGCTTCTCCCGGTTGTTATGACTCTCATTGCAAACCAGACAAGAGATACTCTCTTTATGAAGATCCTTATCAAAATGTGTTACCCGAATTGGGCTTTGGAGGCCTTTATTATTGCAAATGCTGAAAGGTACACTGGGGTGTGGTTGATAACTCGCTGTAGTTCATTGATGAATAGCAGTTATAATGTCAGTGATTGGCCTATATGTCTAGTTGTTCTCATTGCTTATGGTATAGTTGCTCGAATTGTGGCATTCATTTGTCTCATAATCACCCAAAAGAAGTGA 3264 0.4053 MRNFVSYIALFFLFSFTLLPRIHCAEGAFAPSFYTDEIYKELQNIAILLNKDIKSSLGFCIKDPKKDWEEAFDFTGKLDFVESCVKKKGDFRDRICTAAEIRYYFHGFLVQGAATDNYVKPNKNCNLTSWVSGCEPGWGCSTSTDIDLKKDTKEIPKRTKNCKPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNQTGLCDPYSYQIPQGEPDHTCGSADIWTGVVNNSDIFCSPGSYCPTTTRKVSCDRGYYCRMGSTHQNPCSRFSQCNPNTTNQNMHAYGALLIVALSTVLIFIYNCSDQVLATRERRKAKSREAAAKQVRETVQARERWKIAKDAAKMNKPGLQDQLVRTFSRRKSAKHGEQANPATGNSVLPPMPPEQPSPATKDQSKEPSNLTKMLNSLENDPNSNEGFNLKIGDKNIKKQLPKGKNLHTQSQILRYAYGQIEKEKAQQDKNNLTFSGVISMAADGEEVRSRPAIEVAFKDLTLTLKGKRKHVMRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKIRGCTMTGSILINGRAESIHCYQKIIGYVPQDDIVHGNLTVEENLRFSARCRLSDDLPKPDKVLIVERVIETLGLQGIRDSVVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREAAEGVNVCMVLHQPSYTLFRTFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIVVPDRVNPPDHYIDILEGLVKPNEGVTYQQLPVRWMLHNGYPVPPDMLHFADEISASSSSTNTNHVTKGTEEATDQSFAGEFWEEMKSNVQLQKDHIEATFLSIKDLSNRRTPGISRQYRYYLGRVGKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFLSKDTIDLFSTLVKPLIYLSMFYFFSNPRSTFGSNYAVLVCLVYCVTGMAYALAIYFEPAPAQLWSVLLPVVMTLIANQTRDTLFMKILIKMCYPNWALEAFIIANAERYTGVWLITRCSSLMNSSYNVSDWPICLVVLIAYGIVARIVAFICLIITQKK* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1657 1087 SMART AAA_5 508 700 IPR003593 -
Psa6g1657 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 705 IPR027417 -
Psa6g1657 1087 Gene3D - 470 717 IPR027417 -
Psa6g1657 1087 CDD ABCG_EPDR 479 706 - -
Psa6g1657 1087 ProSitePatterns ABC transporters family signature. 623 637 IPR017871 GO:0005524
Psa6g1657 1087 MobiDBLite consensus disorder prediction 355 396 - -
Psa6g1657 1087 Pfam ABC-2 type transporter 680 1087 IPR043926 GO:0140359
Psa6g1657 1087 Pfam ABC transporter 502 650 IPR003439 GO:0005524
Psa6g1657 1087 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 482 723 IPR003439 GO:0005524
Psa6g1657 1087 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 29 1083 - -
Psa6g1657 1087 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 1083 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1657 Psa-Chr6 91144820 91151023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1657 509 702 Calmodulin-binding Proteins AT2G36910 28.218 1.72e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1657 - - gmx:100812387 1889