Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1656 ATGCAGTGCGGTTTGAATCAGGTTGCAATGAATTGTTTTCCATTCAACATCTACTACGGAGAAAAGAAAGGTGATGCTAAGAGCTTGCAGACACTATCGGGTCTGTCGAACAACTCTACTTATGGCGGGAGTGATGTGAGAAGAACTGGTTCAGAATTAAATTCTCTCGATGCGTCATCAGACAATAGCTCAGACTCCCTCCGGAGGAACGCGTTTCCCAATTTGTCCCAACGACCTAGCAACCTGAGAGTATTTACTGTATCTGAACTGAAGTCAGCCACCAAGAATTTTGGTCGCTCTGTTATGCTTGGTGAAGGCGGATTTGGGTGTGTCTACAAGGGATTGATTAAGAGTTTAGATGACCCTCCTAGTAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAATTCAGGGGCATAAAGAATGGGTAACTGAAGTAAATGTTCTAGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGATATTGTGCTGATGATGATGAAAGGGGAATCCAGCGGCTTTTGATTTATCAATATATGCCCAATGGAAGCGTGGAACACCATTTATCCCCACGATCAGAAACTCCTCTCCCATGGAGTAGGAGACTGAAAATAGCCCAAGATGCTGCTCGCGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGACCATCTGATGGGTTAACTCACGTCTCAACAGCGGTTGTTGGAACAATGGGCTATGCAGCTCCCGAATATATTCAAACAGGACGTCTTACTTCAAAGATTGACGTATGGAGCTACGGTGTCTTCCTTTATGAACTCATTACTGGCAGGCGTCCTTTAGATCGAAATCGCCCCAAGAGTGAGCAGAAGTTGTTGGACTGGATAAGACCATACCTTTCAGATGTGAAGAAATTTCAAATAATTTTGGATCCAAGACTTGAGAGGAAACACCTCTCAAAGTCGGCCCAAAAACTTGCTTTAGTAGCTAACAGATGCTTGGTCAGAAACCCAAAGAATCGCCCGAAGATGAGTGAAGTATTAGAAATGGTGGATCAGATCGTGGAGTTTTCGGGAAGTACTAATCCACAACCACCCATGAATAGTGTAGCCTCAGCCGATGATTCTCAAAACAATGAAATCAAGAACAAGAAGAGGATCATGGATCCAAAACCAGATTTTGAGCAACCTAGAGATGAGGTGACATATGAGGAGGTCCATCAAGATACTGCTGTTGCTGATGAGGTGGTTGTTAATGAGGTGGTTGGTGAGATAGTCCCACCAGGCGCAAACCCTATATGCACACTGATGGAGGATTCGCTAGATGACCAATTGGCTGCTCGGTGCTTATGCCGACCATGCAATAACTTATTCAACCAAGACGTCAAGGCGGCGAGAGATGTGGTGCCATCCAAAAGCCAGAACTCTACGGAAGGTCATAATGAATCTTTTAATCAAGTTCATGGCCAAATACTCTTGATGGATCCATTGCCATCAATCAATGTTGTTCTTTCCATGGTTTCTCAATATGAGAAACAAAGGGAAGTAATTACTTTAGCTCCTATTGAAGTTCAAGGTCCTGAAGCTTTTCCTCAAGCTAATAATGTGTCTGATAGATACGCTACAAATAGGGATACACCTTTAGATTGTTACTTCTATGTTTGCTCACCATTGTCAATTGGCCCAATTGACCAAGGCGGTGACACCAGAAGTTGGAGCTTCAGTGAATTTCGTCATCGGTATGAGGTTTTCCACTCTTGA 1842 0.4305 MQCGLNQVAMNCFPFNIYYGEKKGDAKSLQTLSGLSNNSTYGGSDVRRTGSELNSLDASSDNSSDSLRRNAFPNLSQRPSNLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSLDDPPSKIEVAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYQYMPNGSVEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKIDVWSYGVFLYELITGRRPLDRNRPKSEQKLLDWIRPYLSDVKKFQIILDPRLERKHLSKSAQKLALVANRCLVRNPKNRPKMSEVLEMVDQIVEFSGSTNPQPPMNSVASADDSQNNEIKNKKRIMDPKPDFEQPRDEVTYEEVHQDTAVADEVVVNEVVGEIVPPGANPICTLMEDSLDDQLAARCLCRPCNNLFNQDVKAARDVVPSKSQNSTEGHNESFNQVHGQILLMDPLPSINVVLSMVSQYEKQREVITLAPIEVQGPEAFPQANNVSDRYATNRDTPLDCYFYVCSPLSIGPIDQGGDTRSWSFSEFRHRYEVFHS* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1656 613 PANTHER OS01G0588500 PROTEIN-RELATED 23 420 - -
Psa6g1656 613 ProSiteProfiles Protein kinase domain profile. 97 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1656 613 SUPERFAMILY Protein kinase-like (PK-like) 74 378 IPR011009 -
Psa6g1656 613 ProSitePatterns Protein kinases ATP-binding region signature. 103 131 IPR017441 GO:0005524
Psa6g1656 613 Pfam Protein kinase domain 101 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1656 613 CDD STKc_IRAK 103 381 - -
Psa6g1656 613 PANTHER KINASE 1B 23 420 - -
Psa6g1656 613 Gene3D Phosphorylase Kinase; domain 1 70 182 - -
Psa6g1656 613 MobiDBLite consensus disorder prediction 40 72 - -
Psa6g1656 613 Gene3D Transferase(Phosphotransferase) domain 1 183 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1656 Psa-Chr6 91093119 91100782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1656 10 375 Glycoside Hydrolase AT3G07070 43.360 5.69e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa6g1656 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1656 - - gmx:100305438 677.167