Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1644 ATGGTTATCTCATCAACTGTCAAACATCCAGATGAACATAGTGAAAGCATAGACTGTACTTTTGCTTCTAGATACGTGCGTGAAGCAGTTCCAAAGTTCAAGCTGTCAGAGAGTTCTATACCAAAAGATGCAGCATATCAGATAATAAACGATGAGTTGATGTTAGATGGGAAACCAAGGCTTAACTTGGCTTCATTTGTCACTACTTGGATGGAACCTGAGTGTGATAAACTCATCATGGATTCGCTTAACAAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTGAGCTTCAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTGAGCTTCAGAATCGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTAAAGAGGAAACAGCAGTAGGTGTTGGAACCGTAGGATCATCAGAAGCAATAATGTTAGCTGGTTTAGCTTTTAAAAGGAAGTGGCAAACTAAGAGAAAATCAGAAGGCAAACCTTACGATAAGCCCAACATCGTTACCGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCTAAGTACTTTGAGGTTGAACTAAAGGAAGTGAAACTCTCGGAAGGATACTATGTGATGGATCCATTGAAAGCAGTTGAAATGGTAGATGAGAACACTATCTGTGTTGCAGCCATTTTGGGTTCAACGCAATTGGTGATCTCAAGGCTATCCATAAGCTCTCGGATCATATGA 738 0.4051 MVISSTVKHPDEHSESIDCTFASRYVREAVPKFKLSESSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGKEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVCWEKFAKYFEVELKEVKLSEGYYVMDPLKAVEMVDENTICVAAILGSTQLVISRLSISSRII* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1644 245 Gene3D - 1 68 - -
Psa6g1644 245 PANTHER GLUTAMATE DECARBOXYLASE 100 231 - -
Psa6g1644 245 PANTHER GLUTAMATE DECARBOXYLASE 1 101 - -
Psa6g1644 245 SUPERFAMILY PLP-dependent transferases 8 101 IPR015424 -
Psa6g1644 245 SUPERFAMILY PLP-dependent transferases 100 232 IPR015424 -
Psa6g1644 245 PANTHER GLUTAMATE DECARBOXYLASE 100 231 IPR010107 GO:0004351|GO:0006536|GO:0030170
Psa6g1644 245 PANTHER GLUTAMATE DECARBOXYLASE 1 101 IPR010107 GO:0004351|GO:0006536|GO:0030170
Psa6g1644 245 Pfam Pyridoxal-dependent decarboxylase conserved domain 42 232 IPR002129 GO:0016830|GO:0019752|GO:0030170
Psa6g1644 245 Gene3D - 99 235 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1644 Psa-Chr6 90222900 90224480 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1644 1 231 Calmodulin-binding Proteins AT5G17330 77.922 4.06e-127 367