Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1637 ATGGCCTGTTCATCAACGAAAGAGATTGATAAAACTGTGGCGGCTTTGGTGGAAGAGCTTGAGAAGTTGGTAGGGTTCCTTGTAAAGTGGCTGGAGTTCCAAGCCAGTGATCTGGGCCTTCTCGTTGAAAAACCACAATTGAACAACTTGGTTTGGCCCAGAGGACCATCTCCAAGGATTCTACACTATTATTGCCGATGCTGCATCAAAGGAGTGTCTGCGAATCCGGGTTCACAACTAAAGAAAGAGTTGTCTGAGACAGACTCAATTTATGATTCTGAGAAACTCGCCGAGAGAATCGCTAAGTTGTCTGGTGGAGTTGCTTGTCATCAAGTGGATGATCAACAAAAAGGTGGTAAGCAAGAAGTTCCAGGAATGAAAACAGTACAGACAGTTTTGGAGCGAACTGCCAACACCTGTGGTCTATATGATATGCCTGATGCCCTCTGTCTTAAGGATTCTCTAACCGCTGTCCGCAATGCTACACAAGCTGCGACTCGCATACATCGAGTATTCAGAATGCAGTCCTTTCAGAGGAAGCAGTTAACTCAGTATGAGGATGATGAGTTTGGTTTGTTAGATCAGAGGGTTCTTTCCTACTAA 603 0.4494 MACSSTKEIDKTVAALVEELEKLVGFLVKWLEFQASDLGLLVEKPQLNNLVWPRGPSPRILHYYCRCCIKGVSANPGSQLKKELSETDSIYDSEKLAERIAKLSGGVACHQVDDQQKGGKQEVPGMKTVQTVLERTANTCGLYDMPDALCLKDSLTAVRNATQAATRIHRVFRMQSFQRKQLTQYEDDEFGLLDQRVLSY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1637 200 Gene3D GroEL 74 109 IPR027409 -
Psa6g1637 200 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 107 199 - -
Psa6g1637 200 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 107 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1637 Psa-Chr6 89972914 89974146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1637 125 200 CAMTA Transcription Factor Family AT5G09410 62.338 3.15e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1637 K21596 - gmx:100818124 125.176