Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1621 ATGGGGAAGAAGCCAAATTGGTTTTCCAATGTGAAGAAAGCTCTTAGTCCTGACTCAAAAGAAAACAAACACCAGAATTCAAGCGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAACTACACACTTCAGACTCATACCCAGAAACTGATCAAGCACCTCCTTTTCCTCCACCTGAGGAGGAGAATACTTTAACTCATGTTGAGAGTGAAAACAGTCATGATCATGTTGAAGTTGTAACAGATGTGGATGCTGATGTATCTGTTCATGATGTCATGACAGAAACCGCTGAGGTTCAAGTTCAAGTCACTCCAATTGTTCGGATTGTCGGTATACCAAATAACGAAGTCGCGGCAATCAAGATTCAAACCACTTTTCGGGGATACTTGGCAAGAAGAGCATTCCGGGCTTTAAGGGGACTGTTCAGATTGAGATCGCTAATGGAAGGGCCCGTGGTAAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAGACTTTAGCACATGTGCAATCTGAGATTCGTTCGAGGCGGATCAGGATGTTAGAGGAGACCCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAGCTAGAGATCATACAGATTGGGGAGGAATGGGATGAAAGCATACAATCAAGAGAACAAGTTGAAGCCAAATTATTAAGCAAATACGAGGCTACTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAACGGGAGGAATTCATCGAAATCTATAAATCCAATGTTCATGGATCCAACCAATCCTGCTTGGGGATGGAGCTGGTTGGAACGTTGGATGGCAGCCAACCAAAGTCCGGTAGAAAAAGAGAAAAACAACAATCCATCTCTAAAAAGTTCAGTTCGCAGCACTACCAGTTCTGAAATAAGCAAATCATTTGCTCGTTTCCAGCTCAATACCGAAACTCATTCTCCAACAGCCAGTCAAATTCCGGGTTCGCCAAACTTCCTATCCAATTCAAAGCCTCCTAAGCCAGTGGTCAGTAAGAAACTGAATAAGGCAAGCCCGAAGGAGAGTTTTATTCTCGACGATGACACCAAAAGCATGATGAGTATGCAGTCGGAGCGAGTCCAAAGGAGGCACTCCATTGCTGGATCAATAGTGAGGGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGTCAACTAAATCTGCAAAAGCTAAATCCAGGTTGCAAAGTCCATTAGCTGCAGAGAATGGAACACCGGATAAAGTGTCCATTGGAAATGCAAAGAAGCGGCTTACTTTCCCGGCTTCGCCTGGCAGACCAAGGCGGCATTCAGGTCCACCAAAGGTGGAAAGCAGCTTAAATGCAGAAATTACTGTTGGCAATGGTGTGGCTGGTTGA 1404 0.4409 MGKKPNWFSNVKKALSPDSKENKHQNSSGSKKKWFGKKKLHTSDSYPETDQAPPFPPPEEENTLTHVESENSHDHVEVVTDVDADVSVHDVMTETAEVQVQVTPIVRIVGIPNNEVAAIKIQTTFRGYLARRAFRALRGLFRLRSLMEGPVVKRQAISTLRSMQTLAHVQSEIRSRRIRMLEETQALQKQLLQKHTKELEIIQIGEEWDESIQSREQVEAKLLSKYEATMRRERAMAYSFTHQKNGRNSSKSINPMFMDPTNPAWGWSWLERWMAANQSPVEKEKNNNPSLKSSVRSTTSSEISKSFARFQLNTETHSPTASQIPGSPNFLSNSKPPKPVVSKKLNKASPKESFILDDDTKSMMSMQSERVQRRHSIAGSIVRDDESLASSPSVPSYMVSTKSAKAKSRLQSPLAAENGTPDKVSIGNAKKRLTFPASPGRPRRHSGPPKVESSLNAEITVGNGVAG* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1621 467 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Psa6g1621 467 MobiDBLite consensus disorder prediction 280 298 - -
Psa6g1621 467 MobiDBLite consensus disorder prediction 279 298 - -
Psa6g1621 467 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 463 - -
Psa6g1621 467 MobiDBLite consensus disorder prediction 314 347 - -
Psa6g1621 467 Pfam Protein of unknown function (DUF4005) 384 441 IPR025064 -
Psa6g1621 467 MobiDBLite consensus disorder prediction 1 73 - -
Psa6g1621 467 MobiDBLite consensus disorder prediction 386 408 - -
Psa6g1621 467 MobiDBLite consensus disorder prediction 383 467 - -
Psa6g1621 467 MobiDBLite consensus disorder prediction 314 336 - -
Psa6g1621 467 SMART iq_5 113 135 IPR000048 GO:0005515
Psa6g1621 467 PANTHER IQ-DOMAIN 5-RELATED 1 463 - -
Psa6g1621 467 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Psa6g1621 467 Gene3D - 100 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1621 Psa-Chr6 88226739 88229076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1621 1 466 IQD Protein Family AT5G03040 51.139 6.26e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1621 - - gmx:100799058 608.216