Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1615 ATGGCCACCAACAACCCTTGTTCTCATTCCTCTTTCCTCTTTTTTCTATTGCTTCTACTGCATTTTACTTTGGGAAAAAGCCAGCTACAGGTGAATTATTACTCCAGCAGCTGCCCAAAAGCTGAAGAAATCATCAAGCAACAAGTCACTGTCCTATATCATGAGCATGGAAACACAGCCATTTCATGGGTTAGAAATCTCTTCCATGATTGCGTTGTTAAGTCATGTGATGCGTCCCTGCTTTTAGAGACGGCGCACGGTGTAGTATCGGAGCAGACATCGGAGAGAAGTTTCGGGATGAGAAACTTCAAGTATGTCAACACGATCAAAGCTGCTGTGGAGAAAGAATGTCCGTTGACAGTGTCATGTGCTGATATTGTTGCCCTTTCCGCTAGAGACGGCATTGCCATGTTGGGAGGTCCTTCAAATATTGAAATGAAGACAGGAAGAAAAGATAGCAAAGAAAGCTACGTAGGAGTGGTGAAAGACTTGATTCCAAATCATAATGACTCCATATCCTCAGTGCTATCTCGTTTTCAAGACATTGGCGTTGACCTTGAAGCCACAGTTGCTCTTTTAGGAGCACACTCAGTTGGAAGAGTACACTGCATGAATCTGGTCCACAGACTCTACCCAACAGTGGATCCAACACTAGACCCTACACATGCTTCATATCTAAAACGTAGGTGTCCAACACCAAATCCAGATCCAAAAGCTGTCGAATATGTGCGAAACGATCTGAAAACACCTATGATTATCGACAACAATTACTACAAGAACATTTTACAAAACAAGGGTCTTCTCACTTTGGATGCAGAGTTAGCCACTGATCCAAAAACAGCACCTTATGTACAGAAAATGGCAGATGATAATGGTTACTTCAATGAGCAATTTTCAAGGGCTATTGTTTTGTTGTCGGAGAATAATCCTCTTGTTGGAGATGAAGGTGAAGTGAGAAAGGACTGTCGCTATGTTAATGCTATATAA 987 0.4215 MATNNPCSHSSFLFFLLLLLHFTLGKSQLQVNYYSSSCPKAEEIIKQQVTVLYHEHGNTAISWVRNLFHDCVVKSCDASLLLETAHGVVSEQTSERSFGMRNFKYVNTIKAAVEKECPLTVSCADIVALSARDGIAMLGGPSNIEMKTGRKDSKESYVGVVKDLIPNHNDSISSVLSRFQDIGVDLEATVALLGAHSVGRVHCMNLVHRLYPTVDPTLDPTHASYLKRRCPTPNPDPKAVEYVRNDLKTPMIIDNNYYKNILQNKGLLTLDAELATDPKTAPYVQKMADDNGYFNEQFSRAIVLLSENNPLVGDEGEVRKDCRYVNAI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1615 328 Gene3D - 32 326 - -
Psa6g1615 328 Gene3D Peroxidase, domain 2 166 305 - -
Psa6g1615 328 PANTHER PEROXIDASE 25-RELATED 15 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 CDD secretory_peroxidase 28 325 IPR033905 GO:0004601|GO:0042744
Psa6g1615 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 SUPERFAMILY Heme-dependent peroxidases 28 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PANTHER PEROXIDASE 21 15 325 - -
Psa6g1615 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g1615 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1615 Psa-Chr6 87946242 87948459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1615 31 326 Peroxidase AT2G37130 74.662 1.08e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1615 K00430 - gmx:100785485 537.724