Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1579 ATGGACAAAATCAAATCTCGTCGCACCAACTCCAAACTTCATCTTCCTCAAGGGAAAGATCAGAGTCATAAACAGCCACATCATCAAGATATGCCACCTGATTCTAGCTCTTCCAGTGGTGGGGTCGGAGACAAAGATTCGTTCTCGTTTAAATTTGGATGGAAATCTTCTAAACAACCGGTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCAATGACTGAATCCAAGAGAAGATCCCCAGGTGTTATAGCCAGATTGATGGGTCTTGACGGGCTTCCTTCCCAGCATCATGTTAATAAGCAACACATGGATCTGCATAACTCAGTGGCTTTGGAGAAAACTCGAAGCAGAGGAACGCCAAATGAAGGCCGGTCCTCTAGGAGAAGCTCAAGGGATCAGGAGGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGTGGTAGGTATTCGTCTTCAGACTTGAAGGGTCATGAAGATGAAGATGAAATGTCATTCATTGAGCAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTATCAGTCTTCAAAGGAATTCCATGAGACACTTGAGGTTTTGGACTCAAACAAGGATCTTCTGCTGAAATACCTCAAGCAGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTACAAGCTACACCTTTTCAATCACATTCCGGTCATGTAGAACCATCCAATATGGAGAACTTTGAACATGGTTTAAATTGGAGGTTAGATAAGGAGGCACAACATGTGAATTACAATAGGTTTCATCAGAAGCACTCTGATGATTATCACAACCAGTTTGACAAAAGGCGTGTGATGCAGAATTCACCAAGATCATCAAAGCACCGGTTTAAGGGTAGCCGTGAACAATCTGCAGTCCCAACAAAGATTGTTGTCCTAAAACCGAATATTGGAAAACTACAGAATGGTACCAAAATTCAATCATCACCTTGTTCTCCGCATAACTTTCTGTCAGAACATGGAAATCAAGTTGAATTTTCAGATGTCAGATTTAGAGATACTGAACTGTATCAAAAAATTAATTTGCCCGACAGTTCCAGGTCTTTTAGGCACAATTCTTTAGAATCTACAGAAATTGCAAAAGAAGTAACTAGGCAAATGAAAAACAGTCTGACCAGAGGTTGTATGATGTCTTCCTCTTCAAGATTTAAAGGATGCACTAGAAGCGATAGTTCAAGCAGTGCTTCTGGGAACGAATCTCCAGAGGAAATAAAAGCAACTATGGGTGACCCATTTGACTTAAGTAAACGTAGCAGGCGGTCATCGCGTTCTAGCGAATCATCTGTCAGTAGAGAGGCAAAAAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAATCTCAAGAGGTGCAAGGCTCGAGCAGGAGCAGCACGCTGGCTGATATGCTAGCATTCCCCGGTAAGAAAATGAAGGGTACACGGTTCGACAGCATGTCAAGTGGAGGAGGTTTCTATGATAAGTTTACTCGCCATGGTGAACCTTCTGGATTGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATGTATTGGAAGTCTGTCGAGGTCGAAATCTCTTCCTGCTTCATCTACTGTTTTTGGAAATGCTAGAACATTTGTGTGTGCTGAAGCCCTTCGTAATGATCGATATATGGGGCCAAAGGACCTTAAACGGGAGAGAAGAAGAGCTACAATGAGTCTTGATCATAGACATGGTTTGAATTCTGGAAGCACAATATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATCGAAGCAGGAAATTAACGAGTTCTCTCCAGACTTAAATGCAGTTCAAAATAACATAATGATCAATCTTGAACAATATTCACCCAATCTAGAAGTTCATTCTTCTGAAACCTTTGGCCAACGCCTTAGAAATACAAGTGTTGTTAGTGATGATGTCGTGGATGTAGCAAACGGAAACACAGTTGAGCCTTTTGAACCTTCTTCGGATAAGGCGCTTACTGGAACATCGTCATGTGTCTTAATAAAAGGAGACAGTAGTGTTGTTGAAGACAATTCAATGCAAGAGGAAGTATCAGCTGGTTCTACTGGTGGAATTTCAGTCCTCTCTGAAGCACCTGCACCTGGACTTGAATCTCCATGCTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTCTAGATCCTTCTTTTACAGATGACGTGTCATCTTCTTCTGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTAGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAACATGTGGAGGGACCTATGCAAATTTCAAGTGATGAAGATGGCCTGGAAGCATCTGCTGAAATGTTAGAAGAAAATGCATTATGGAAAACCGAAGATAGCTGGGAGTCTTCTTACATTACTGATGTCTTGTCTGAATCTGCTATCGTCAAGGCTCAAACTCAACATATTTTGGAAGTTTGGCATTCTCTAGAATGCCCTGTGAGTCTGTCTGTGTTTGAAGAGCTTGAAGAGAGGTACAGTGATTGGACTATTTGTTCAAGGTCTGAAAGGAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCATGAGCAATCTACTGACCCACAACCATGGGTGGTGGGTAATGCAGGCAAAACTTTTGGATCAAAAAGGATTAATGGGCTCCAAGATGGTATTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAAGATGATGATGTCCTGAGTAAGTTGCTGATTGTGGAATCTCAATGGTTGAACTTGAGAGATGACATTGATGTAATAGGAAGAGAAGTTGAGATATTGATATTAGATGATTTAGTGGCAGAAATAGTTGGTATCTAG 2907 0.4183 MDKIKSRRTNSKLHLPQGKDQSHKQPHHQDMPPDSSSSSGGVGDKDSFSFKFGWKSSKQPVGTPIKKLLAEEMSPMTESKRRSPGVIARLMGLDGLPSQHHVNKQHMDLHNSVALEKTRSRGTPNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSDLKGHEDEDEMSFIEQKFMDAKRLATYQDYQSSKEFHETLEVLDSNKDLLLKYLKQPDSLFKKHLNDLQATPFQSHSGHVEPSNMENFEHGLNWRLDKEAQHVNYNRFHQKHSDDYHNQFDKRRVMQNSPRSSKHRFKGSREQSAVPTKIVVLKPNIGKLQNGTKIQSSPCSPHNFLSEHGNQVEFSDVRFRDTELYQKINLPDSSRSFRHNSLESTEIAKEVTRQMKNSLTRGCMMSSSSRFKGCTRSDSSSSASGNESPEEIKATMGDPFDLSKRSRRSSRSSESSVSREAKKRLSERWKMAHKSQEVQGSSRSSTLADMLAFPGKKMKGTRFDSMSSGGGFYDKFTRHGEPSGLVEPLGISSKDGWRDACIGSLSRSKSLPASSTVFGNARTFVCAEALRNDRYMGPKDLKRERRRATMSLDHRHGLNSGSTISGHKKSWSLLSSKQEINEFSPDLNAVQNNIMINLEQYSPNLEVHSSETFGQRLRNTSVVSDDVVDVANGNTVEPFEPSSDKALTGTSSCVLIKGDSSVVEDNSMQEEVSAGSTGGISVLSEAPAPGLESPCCKDADQPSPISVLDPSFTDDVSSSSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMQISSDEDGLEASAEMLEENALWKTEDSWESSYITDVLSESAIVKAQTQHILEVWHSLECPVSLSVFEELEERYSDWTICSRSERRLLFDRINSGIVKIHEQSTDPQPWVVGNAGKTFGSKRINGLQDGIFQMLGSQGKVEDDDVLSKLLIVESQWLNLRDDIDVIGREVEILILDDLVAEIVGI* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1579 968 MobiDBLite consensus disorder prediction 391 478 - -
Psa6g1579 968 MobiDBLite consensus disorder prediction 1 30 - -
Psa6g1579 968 Pfam Protein of unknown function (DUF3741) 175 219 IPR022212 -
Psa6g1579 968 MobiDBLite consensus disorder prediction 391 421 - -
Psa6g1579 968 Pfam DUF761-associated sequence motif 79 101 IPR032795 -
Psa6g1579 968 MobiDBLite consensus disorder prediction 1 85 - -
Psa6g1579 968 PANTHER AFADIN 20 966 - -
Psa6g1579 968 MobiDBLite consensus disorder prediction 429 466 - -
Psa6g1579 968 MobiDBLite consensus disorder prediction 113 140 - -
Psa6g1579 968 Pfam Domain of unknown function (DUF4378) 814 964 IPR025486 -
Psa6g1579 968 PANTHER AFADIN 20 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1579 Psa-Chr6 84895639 84901699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1579 60 966 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.190 8.87e-133 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1579 - - ccaj:109788117 1118.61