Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1553 ATGGAGAACCAAAAGACAGAAACATGGATTGAAAAAGCAAAACCATTCATAGCTGTTTTGTTTTTGCAATTAGGTTATGCAGTTATGGATGTTTTATCAAAAGCTGCATTGAATAAAGGAATGAGCAACTATGTTTTTGTTGTCTATCGTCATACTGTTGCATTCATTGTCATTATCCCTTTTGCACTCTATTTTGAAAAGAAAGTGAGGACGAAAATGACCGTTTCAATCTTCATAAAAATATTGGTGCTGAGCTTGCTAGAGCCAGTTATTGATCAAAACTTGTACTTTTTGGGAATGAAATACACAACAGCAACCTTTGCAGCTGCCATGACCAATATGCTTCCTGCTTTTACTTTTATATTGGCTGTCATTCTTAGGCTTGAGAAGATAAACATAAAAAGTATACGAAGTCAGGCAAAGGTGCTGGGTACTATAACAACCGTCGCAGGTGCCATGATGATGTCACTAGTTAAAGGCCCAATACTTTTAGAGGCATTTGGAAACAAAAGTCACAACCATGATAGTGGTGCTGTAACTAGTCAACATGCAATAGCTGGAGGAGTGTTGATCTCAATAGGATGCATTAGTTGGGCTTGTTTTTTTAATCTTCAAGCTATTACCCTACAAACATACCCTGCACCACTTTCTCTTTCCTCATGGATATGTCTCATGGGCACCATTGAAGGTGCAGCTGTGGCTTCAGTTATGGAATGGGGTCATCCTTCAGTTTGGTCCATAAAATGGGATATGAGATTGCTGTCTACTATTTACACAGGTCTATTCTGCTCGGGCCTAAGTTATTATCTGCAAGGAGTCGTGATGAAAACAAGAGGTCCGGTTTTTGTCACGACATTTAATCCTTTTAGTATGGTGATTGTAGCTATCTTTGGATATTTTCTTCTCGCGGAACAAATGTTTCTCGGAAGGGCAATAGGTGCATTTATCATTTGTTTGGGTTTATACCTTGTTGTGTGGGGAAAAAGCAAAGATTATGATAACTCGTCGGAAGCCATTATTGAAGAGCCTGTTGAATCACCTAAGCAAACTGCAGGTGAAAATTGCACTCATGAAGTCATCATTATTCGTTAA 1092 0.3864 MENQKTETWIEKAKPFIAVLFLQLGYAVMDVLSKAALNKGMSNYVFVVYRHTVAFIVIIPFALYFEKKVRTKMTVSIFIKILVLSLLEPVIDQNLYFLGMKYTTATFAAAMTNMLPAFTFILAVILRLEKINIKSIRSQAKVLGTITTVAGAMMMSLVKGPILLEAFGNKSHNHDSGAVTSQHAIAGGVLISIGCISWACFFNLQAITLQTYPAPLSLSSWICLMGTIEGAAVASVMEWGHPSVWSIKWDMRLLSTIYTGLFCSGLSYYLQGVVMKTRGPVFVTTFNPFSMVIVAIFGYFLLAEQMFLGRAIGAFIICLGLYLVVWGKSKDYDNSSEAIIEEPVESPKQTAGENCTHEVIIIR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1553 363 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0016021|GO:0022857
Psa6g1553 363 PANTHER WAT1-RELATED PROTEIN 10 347 - -
Psa6g1553 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Psa6g1553 363 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020|GO:0016021
Psa6g1553 363 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Psa6g1553 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1553 Psa-Chr6 81431023 81434289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1553 1 362 Nodulin-like Gene Family AT2G37460 59.290 1.09e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1553 - - cam:101496299 531.946