Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1547 ATGGAACCTTTCTTCCTTTCCTCTCTCTCATTCATCTTCCTACTTTTCTTCACTTTTTCTTCTGCTCAGATGCCAGGTTTTGTGAGTTTGGACTGTGGAGGTGATAAAAATTTCACTGATGAAATTGGTCTTCAATGGAGTCCTGATGATGGAATGGCTTACGGAGAAATAAGCGCGATTTCGGTTGCGAATGAGACACGGAAGCAATACACGACGCTTCGAAACTTTCCTGCTGATTCTAGAAAATACTGCTACACACTTGATGTTGTTAGCAGGACAAGGTATCTACTGAGGGCAACATTCTTGTATGGAAATTTTGATAACAACAATGTTTATCCGAAATTCGATATTTCGATTGGGGCTACTCAATGGTCTACTATTGTTATATCGGATGCGAATACGACAGAAGTAAGAGAAATTATATTTTTGGCTTCAAGTCCTACTGTTAGTGTCTGTCTATCGAATGCAACAACGGGGAAGCCGTTCATATCTACGCTTGAACTTAGACAATTCAATGGTTCGGTTTATTTTTCGTTCTATGAGGAACATTTCTACCTCAGTCTCTCTGCAAGAATAAATTTCGGTGCAGAGACTGATGAGGCAATCAGGTATCCCGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCGAATTACCTCGTCGATGTTGCTGATGGAACTGAGAAAATTTCCACCAATGTATCCATTGATGTCAACAGAGATGAAATGCCACCGTTGAAAGTAATGCAGACCGCGGTAGTAGGTACGAATGGATCTCTAACGTACCGGTTGAACTTGGAGGGTTTTCCTGCTATTGGAAGAGCTTACAGCTATCTTGCAGAGATAGAAGATTTTCCTAAAAACGAATCAAGAAAATTCAGGCTAGTACTTCCAGGCCAGGCTGATATTAGTAAAGCCGTGGTAAATATTGAAGAGAATGCGCTAGGAAAATATCGTGTTTATGAACCTGGATTTAACAATATATCGCTACCGTTTGTAATGTCGTTTAAATTAGGCAAAACAGCTGATTCTTCTAGAGGTCCTCTTCTAAATGCCATGGAGATTAATAAGTATCTAGAGAAAAACGATGGTTCTCCTGATGGAGAAGCTATATCTAGTGTGGTTTCTCAGTACTCTTCGAAAGATTGGGCAAACGAAGGGGGTGATCCGTGTTTACCTGTCCCGTGGTCATGGATCCTATGTAGCTCAGATCAACAGCCGAGAATAGTTTCGATTTTGTTGTCCGGGAAAAACTTGACGGGCGATATTCCTTTGGACATTGCTAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGGAATATGCTGACAGGCCCCGTACCAGATTTCACCGGATGCACAGACTTAAAGATCATTCATCTTGAGAACAACCACTTGGCAGGTGTGCTGCCAGCCTCTTTGGGGAACCTTCCGAATTTGAGGGAACTGTATGTTCAGAACAATATGTTATCTGGAACCGTACCATCAGAACTTTTGAGCAAAAATTTGGTTTTAAACTACTCTGGAAACTATGATCTTCATAAAGGAAGTAGAAAAAAAGACCAATTGTATGTGATTATTGGTTCAGCAGCTGGAGCCGCCATTTTACTTTTAGCTACTATTATATCTTGCTTGTTTATGCATAAAGGAAAGACAAAATATTATGATCAAGACCACCTAATTTCGCTCGCTACTCAAAACCTGGAATCTAAGAATGATGGTCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTAAAATCTCTACGAATAATTTCGAGAAAAAAATTGGTTCCGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGACAAATGGAAAAGAGATAGCAGTTAAAGTTTTAACTAGTAATACCTATCAAGGCAAAAAAGAATTCTCTAATGAGGTGAGTCTTTTGTCAAGAATACATCACAGAAACCTGGTGCAGCTTCTTGGTTATTGCCGAGAAGAAGGAAACAGTATGCTTATTTATGAGTTCATGCATAACGGAACTCTCAAGGAACATCTTTATGGCCCGTTAACACACGGACGGAGTATCAATTGGATTCAGCGACTTGAAATCGCCGAAGATTCTGCTAAAGGTATTGAGTATCTTCACACAGGATGTGTCCCTGCAGTTATCCACAGAGACCTAAAAAGCAGCAACATTCTTCTAGACAGACACATGAGAGCTAAGGTTTCAGATTTTGGTCTTTCGAAACTCAATGTTGACGGAGTCTCCCATGTATCTAGCATAGTTCGCGGTACAGTGGGATATCTGGATCCCGAGTACTATATTTCTCAGCAGTTGACTGACAAGAGTGATATTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCAGGTCAAGAAGCAATATCTAATGACAGTTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCGAAATTGCATATTGAGAGTGGTGATATACAAGGTATAATTGATCCAGCATTGCACAACGGCTATGATCTACAATCGATGTGGAAAATCGCGGAGAAAGCGTTGATGTGCGTTCAACCTCATGGACACATGCGGCCATCGATTTCAGAAGTTGTGAAGGAAATTCAAGACGCAATTGCGATTGAAAGAGAAGTGGAGAGTGTTTCGGATGAGATGACGAGAAATTCAGTTCATTCTTCGATTAACATGGGTTCTATGGATCTCGCTGCTACGGAGAATTACCTCGCGATTGATGATTCCATTGCACGCCCTACTGCACGATAG 2763 0.4061 MEPFFLSSLSFIFLLFFTFSSAQMPGFVSLDCGGDKNFTDEIGLQWSPDDGMAYGEISAISVANETRKQYTTLRNFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATQWSTIVISDANTTEVREIIFLASSPTVSVCLSNATTGKPFISTLELRQFNGSVYFSFYEEHFYLSLSARINFGAETDEAIRYPDDPFDRIWESDSVKKANYLVDVADGTEKISTNVSIDVNRDEMPPLKVMQTAVVGTNGSLTYRLNLEGFPAIGRAYSYLAEIEDFPKNESRKFRLVLPGQADISKAVVNIEENALGKYRVYEPGFNNISLPFVMSFKLGKTADSSRGPLLNAMEINKYLEKNDGSPDGEAISSVVSQYSSKDWANEGGDPCLPVPWSWILCSSDQQPRIVSILLSGKNLTGDIPLDIAKLTGLVELWLDGNMLTGPVPDFTGCTDLKIIHLENNHLAGVLPASLGNLPNLRELYVQNNMLSGTVPSELLSKNLVLNYSGNYDLHKGSRKKDQLYVIIGSAAGAAILLLATIISCLFMHKGKTKYYDQDHLISLATQNLESKNDGHAEVAHCFSFSEIKISTNNFEKKIGSGGFGVVYYGKQTNGKEIAVKVLTSNTYQGKKEFSNEVSLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWIQRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLNVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALHNGYDLQSMWKIAEKALMCVQPHGHMRPSISEVVKEIQDAIAIEREVESVSDEMTRNSVHSSINMGSMDLAATENYLAIDDSIARPTAR* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1547 920 SUPERFAMILY L domain-like 398 514 - -
Psa6g1547 920 Gene3D Ribonuclease Inhibitor 374 524 IPR032675 -
Psa6g1547 920 SMART serkin_6 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1547 920 Gene3D Phosphorylase Kinase; domain 1 568 671 - -
Psa6g1547 920 PANTHER OS07G0107800 PROTEIN-RELATED 12 920 - -
Psa6g1547 920 Gene3D Transferase(Phosphotransferase) domain 1 672 894 - -
Psa6g1547 920 Pfam Protein tyrosine and serine/threonine kinase 598 798 IPR001245 GO:0004672|GO:0006468
Psa6g1547 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Psa6g1547 920 ProSiteProfiles Protein kinase domain profile. 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1547 920 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Psa6g1547 920 Pfam Malectin-like domain 30 360 IPR024788 -
Psa6g1547 920 PANTHER TYROSINE KINASE DOMAIN PROTEIN 12 920 - -
Psa6g1547 920 SUPERFAMILY Protein kinase-like (PK-like) 583 866 IPR011009 -
Psa6g1547 920 CDD STKc_IRAK 602 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1547 Psa-Chr6 81035142 81040050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1547 17 706 Receptor kinase-like Gene Family AT2G37050 65.330 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa6g1547 Malectin_like 7.1e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1547 - - gmx:100798007 1534.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1547 6 81035142 81040050 Psa6g1547 6 81035142 81040050 ECH