Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1541 ATGGCATCCAATAGGGGTCAAGGAGGAATTCAGCAATTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAAGAGATTGCTGAATACCGTGCCAAGCTTGAATCTGAGTTTCAAAAGAAAGTTTCGGATAGTAGTGGTGACTCTGGAGCCAATGTTAAGCGACTTGACCAAGAAACTGAAGAAAAAATCCATCATCTGAAAGAAGAAGCTGCAAGAATTTCGGAGGATGTTGTTGCCATGCTCCTTAAGTATGTAACGTCTGTGAAAAAGTAG 333 0.4204 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAEYRAKLESEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKEEAARISEDVVAMLLKYVTSVKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1541 110 Coils Coil 10 59 - -
Psa6g1541 110 Gene3D - 1 110 - -
Psa6g1541 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Psa6g1541 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Psa6g1541 110 MobiDBLite consensus disorder prediction 57 76 - -
Psa6g1541 110 Coils Coil 76 96 - -
Psa6g1541 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Psa6g1541 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1541 Psa-Chr6 79544456 79548028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1541 1 109 Primary Pumps ATPases(2) AT3G01390 73.394 5.29e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1541 K02152 - gmx:100306550 186.422