Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1537 ATGGATTGGGGCATTTGGGACGAATCTGGGTCATGGACATGTCCCTATGAAGTGGCGGACTTGGGTGGAAAACTTGTAGAAAGAATCCGTTCACTGACATTTGCAAAGGTTGTCCACCAAGAAATAAGTTGGTTTGATGACCCTGACAGTGGTGCAGTTGGTGCAAGACTATGGACAAATGCTTCAACGGTTAAAAGTCTTGTTGGTGACACATTGGTTCTTATTGTGCAAAAAATATCAACAATCCCAACTGGTCTAGTTGTAGCATTCACTGCTAATTGGATTCTCGCTTTTATAGTCTCGGCTTGTGTCACCAGTGGTTCTTGTGCAAGGAATCATTCAGATGAAGTTTCTCGAAGGATTCTGCAAAGATTCCGAGGTGATGCATGA 390 0.4333 MDWGIWDESGSWTCPYEVADLGGKLVERIRSLTFAKVVHQEISWFDDPDSGAVGARLWTNASTVKSLVGDTLVLIVQKISTIPTGLVVAFTANWILAFIVSACVTSGSCARNHSDEVSRRILQRFRGDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1537 129 SUPERFAMILY ABC transporter transmembrane region 17 105 IPR036640 GO:0005524|GO:0016021
Psa6g1537 129 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 21 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa6g1537 129 Gene3D ABC transporter type 1, transmembrane domain 15 110 IPR036640 GO:0005524|GO:0016021
Psa6g1537 129 Pfam ABC transporter transmembrane region 21 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa6g1537 129 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 103 IPR039421 -
Psa6g1537 129 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 21 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1537 Psa-Chr6 78687137 78689881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1537 21 98 Calmodulin-binding Proteins AT2G36910 31.250 1.38e-08 50.1