Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1526 ATGTCGTTTGACAATCAGATATTTTGGATGGGAAAGAGTAATGGGAATTTGAATGGCAGTGATGACATGACATATGATAATTCTAGAGGTGAGTCAAAGCGATCTAATCAGTGGTTCGTGGATGGCCCTGAAATGGATCTGTCTCCCAATAAGAAACAAGCAGTAGAGGCTCCAAACAGTTTATTGCCAGGGTTGCTCAACTCCAATATTTCGTCATGGGGAGATTCTTTAAGTTTTCACTCTTTAACTGGCCATTTTACTGCGCAACTATTTGATCCAGGGGCTGCATCTATGAATTTTGAAGATGCAAACATAGATACTAAGTTGAGTGCGGAAAGAAAGGATATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTTAACTACATTAGAAGATTCTCAACCAGCTTTTAATCACGATGGGACTAGAAATGTCAAAGTTAATGAGGTGAAGGAGTCGAGAAATTTCATGTTTGTTCCAACTAATAATCCCTGTGATGGAGTTAGCAGCACTGTGTCACACTCTCATGCATCCAAGGAAGGTGACAATTCAATATCAACAAGCCTCACATACAACAATGGGGATGCCAATGTAATATTGGTCGACGGTGCTTTTGACAGGATGGATACCAATTTAATGTCAACGAGTCAAACTTATAACAAGGGAGATGGCAACTTATCAGCACCTCCGACATACAAAGAGATTTGCAATACAATATTAATGGATCAAGGATACATTAATGTAGATAGTGATGCAATTTCTATTGCTCATGCTTACAACAAGGCCTGTGATAATTCTATGTTGAGTAACCACTTATTCAATAAGGTTGAAGATGACACCATATTGATGGGTCAGACTTACCATCAGAGACCAAATGACATGTCATTTGTTTCTCATTCTTATAATAAAGGAGAAAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGATGCAATTCAATCTGACTCGTTTGTTTCTGACTACGCGCTGTTTATGGGTCAAGCACCTTCGTATATGTCACAAGTTGCAAATGAAAAAGAGTTGGTTAGATCAAGCTCTAAACTAATTCCAAGTACAACCCAGATGTCTGCATTTGAAGCTGAAAATGTTCCCAGGACAAAAGAGGAGATGAAAATGTCTAAAAAAGCTACTTCAAATAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAAGCATGGTCACGGGAGAAGGAACTCCGAGCTGTTATAAAAGGTGCTGGGTATTTGTGCAGCTGTCCATCGTGTAATTTTTCTAAGGTTATTAACGCATACGAGTTTGAGCGGCATGCTGGTTGCAAGACAAAACACCCAAATAATCATATTTACTTTGAGAATGGAAAAACCATATATGGAGTGGTACAAGAGCTCAGGAGTACTCCACAGAATATGTTATTTGAAGTTATTCAGACAATAACTGGTTCACCTATCCATCAGAAATCCTTCCGGATTTGGAAAGAATCCTTTTTGGCTGCAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATTAA 1578 0.3942 MSFDNQIFWMGKSNGNLNGSDDMTYDNSRGESKRSNQWFVDGPEMDLSPNKKQAVEAPNSLLPGLLNSNISSWGDSLSFHSLTGHFTAQLFDPGAASMNFEDANIDTKLSAERKDILDPFGGDASFGLSMLTTLEDSQPAFNHDGTRNVKVNEVKESRNFMFVPTNNPCDGVSSTVSHSHASKEGDNSISTSLTYNNGDANVILVDGAFDRMDTNLMSTSQTYNKGDGNLSAPPTYKEICNTILMDQGYINVDSDAISIAHAYNKACDNSMLSNHLFNKVEDDTILMGQTYHQRPNDMSFVSHSYNKGESTIISFGGCDDDDAIQSDSFVSDYALFMGQAPSYMSQVANEKELVRSSSKLIPSTTQMSAFEAENVPRTKEEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPIHQKSFRIWKESFLAAARELQRICGKD* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1526 525 PANTHER PROTEIN, PUTATIVE-RELATED 5 525 - -
Psa6g1526 525 Pfam Tify domain binding domain 425 479 IPR032308 -
Psa6g1526 525 PANTHER AUTOIMMUNE REGULATOR 5 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1526 Psa-Chr6 76845094 76848808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1526 374 511 PHD Transcription Factor Family AT3G53680 55.072 2.86e-44 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1526 - - mtr:MTR_1g067750 820.846