Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1503 ATGTCCAAAGAAAAAAACTCCAAGCACAATCCATCAAATCTAGTTGCCAAATTAATGGGGCTTGAAACCCTTCCAAAGGGAGAGCCTAATTTATCGAAAGATTATTCTCAAGATATTTATGGTCATCTAGGGTGGCCATTGAAACATCGAAAGGTGGAAGATAGGTTTATGATGTGTAATAAGGAAGTTCATCATTCAAGCGCGGAACAGATTGGTTACAGAGATGGATATGAAACATGGCTGCAATCGCATAGAGGAAGGTGGAGGGAAGATTTTGATGAGGGAAAAATGGCTCTTGTTCATCAGAAATTCATCGAGGCGAAGAATATGTCGACACACGAGGCGCTGCGCCAGTCCAAGCAATTTGAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTGGTCAGGTTTTTGGATTCGCAAAAGCTTTATCAACTTCCCTCTACTCCATCTGACGATGCAAATCGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTGTGGAAAGAGTAAGAAGAATGATAGATTGATTAAGAAACCAGCAAATTCTGATCAAACAAATGTAAGGGAGAATATTAATCGTGGATACTCTCAGGATTCTACTCGAATAGTGGTATTGAAGCCTAGTCCTGGAAGGACTCATATGGTTTCTCCGAGAACTCAATCACCTCAAAGTTTCTATCAGGGAAATGGAAATGATGAAGTACTCGAGTCCATAAAAGTGTCGAAAGAGATGACATTGCAAATGCATCCAAATGATAAAACTTTACATTCTTCAGTATTTTCCAGTGGCTATTCAAGTGATGAGAGCTTTGACAAATCTTATCATGATTTGGAAGCTATGTCGCCAATGCCAAGACATTCATGGGATTGCATCATCAATGTATGTGGAAGTCCTTATTCTACACAATCCTTGGGTCGTGCAACGTGTTCTCCCGAGTCATTGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAACGTTATAACATCTGTTGAAAAAGGTCATCAAGAACATAGCTGTGTGACAGGAAACTCTACTCTCGGTGAAATGCTTTCTCTTTCCCTCGTAAAAAAATCAGTAACATCTGAGGTTGAAAGTGCGAATAAACACCAAGAAGAACCAAGCAAATCTGTTTCTTGCAGTCAATCTTTCAATGAAGAAATGAGCATAGATGATTCTCCTCAAAATGTTTCTCTGTCAAATTCTGTTCCTGCATCTTCTACTGTCTATGAACCTGACCTCAGCGTTGACGCTGACAAAGAACATGGCTCCAAGGTGGTGGCAAAGTCAAAGCGTAAGAGATCATCATTTAAAGGGAAGGTTGCAAGTTTCTTGTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGCACATCTCAACCAAAAGACGAATTCGAATCGGCTGTCACCGAAACATCGATACCGCAAGCAAATTCACCTGGAGTCCTCGGAGATAATGTGTCTCAAAGCTTTAATGTTGGTGAATTTGAAGAATCTCTTGCAGCTAAATGTGAATCATTAGGCAAAACTTCAACAGATTCAGTCTCTAGTGAACAAGAAGACATGATTACACTAGAGCCTGGATCAAGTGAGTCAAAGCTTGTGGTGCTAGAGGTTTCAACTGATAAACAGGATCAGCCTAGTTCAATCTCAGTGTTAGAATCTACATTTGAAGATTACAATACAGCTCATGAGTCCTTGCAATGCATGAAAAGTGCTCACATGGAATCTCCGGAGCCTCTGAAGTCCAATTTGATTGACAAATCACCACCTATAGAATCAGTAGCTAGGACCCTATCATGGGATGATGATTCTTGTGGAGAGTTAACAAGTCATTATTATAATCCATTGAAACCTCTAAGAACTTCTTCCTTAGAGACCAAGTTAGAGGAACATGAATGGCTTCTCTTGGTCCAAAAGCTATTATCAGTATCTGGACTTGATGATGATGATGATCAAGAACAACAACAGTATGAGTCATTTCACACAAGATTTCACTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAACATAAATGACAACAAGGACAATACTCAGCCTCTTAATGAGGCTAAGAGAAGGAAAATGAGATCAAATAAAAAACTTATATTTGATTGTGTTAATGATGCATTATTGGAAGTTGTTAGTTGTGATGATGGGTCAGAGAATTACTTCAAGATGTACTGTGGGACCAACAGAAGGACCTTCCAGTTACAAGAGGGTTCATGTTTGATGGACCACATTGTGGCCTATATGAAGGAATTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCATGTTGGGTTGGTCGAGGTAATGAGAATGGAGATTGAAGCTTTGGGAAGGGAAATAGAAGAAACTATCATAGAAGAACTTGTGGAGAATGTTGTGCTTGATATTACAAGCAGATGA 2511 0.3955 MSKEKNSKHNPSNLVAKLMGLETLPKGEPNLSKDYSQDIYGHLGWPLKHRKVEDRFMMCNKEVHHSSAEQIGYRDGYETWLQSHRGRWREDFDEGKMALVHQKFIEAKNMSTHEALRQSKQFEDALDILSSNNDLLVRFLDSQKLYQLPSTPSDDANRITLIKPLKMFGNDKSCGKSKKNDRLIKKPANSDQTNVRENINRGYSQDSTRIVVLKPSPGRTHMVSPRTQSPQSFYQGNGNDEVLESIKVSKEMTLQMHPNDKTLHSSVFSSGYSSDESFDKSYHDLEAMSPMPRHSWDCIINVCGSPYSTQSLGRATCSPESLVCIEAKKRLSERWNVITSVEKGHQEHSCVTGNSTLGEMLSLSLVKKSVTSEVESANKHQEEPSKSVSCSQSFNEEMSIDDSPQNVSLSNSVPASSTVYEPDLSVDADKEHGSKVVAKSKRKRSSFKGKVASFLFSMSKKSTKKKSSTSQPKDEFESAVTETSIPQANSPGVLGDNVSQSFNVGEFEESLAAKCESLGKTSTDSVSSEQEDMITLEPGSSESKLVVLEVSTDKQDQPSSISVLESTFEDYNTAHESLQCMKSAHMESPEPLKSNLIDKSPPIESVARTLSWDDDSCGELTSHYYNPLKPLRTSSLETKLEEHEWLLLVQKLLSVSGLDDDDDQEQQQYESFHTRFHSLESPLDPSLRDTYANINDNKDNTQPLNEAKRRKMRSNKKLIFDCVNDALLEVVSCDDGSENYFKMYCGTNRRTFQLQEGSCLMDHIVAYMKELIANGMRFVWGGDSHSLVVENVVRKEVVHVGLVEVMRMEIEALGREIEETIIEELVENVVLDITSR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1503 836 Coils Coil 803 823 - -
Psa6g1503 836 PANTHER DUF3741 FAMILY PROTEIN 1 836 - -
Psa6g1503 836 Pfam Protein of unknown function (DUF3741) 102 142 IPR022212 -
Psa6g1503 836 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 836 - -
Psa6g1503 836 MobiDBLite consensus disorder prediction 462 494 - -
Psa6g1503 836 MobiDBLite consensus disorder prediction 383 419 - -
Psa6g1503 836 MobiDBLite consensus disorder prediction 374 441 - -
Psa6g1503 836 Pfam Domain of unknown function (DUF4378) 649 827 IPR025486 -
Psa6g1503 836 MobiDBLite consensus disorder prediction 473 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1503 Psa-Chr6 73245190 73248558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1503 1 834 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.333 2.36e-100 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1503 - - mtr:MTR_1g069190 1152.12