Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1481 ATGCACTCATTGTACAAAAAACAAATTTCTGCAGCATGTGGCCTAAGCTGTGAAGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTACTTCCCATGAGTGTCTTACTTTTACTGGATGCAGCTCCTTTGGTTGTTTATCCGTTAATTAATGAGTTAGAGATTGAACTTGCATCTGGAACATATTTGAAGCAAAGCCAGGTAAGGATAATGGGTGTTATTGCTGACAATCAAAATGAAGGAAAAACCTTAGTTGACGTTAACCTGGTACCACTTGGTGAGAAGTTTGACAATATAACTGTGGTTCTGATATCCCGGAGATTTTGGCACAAGAAAGTTCCTCTAAGCAAGACTCTTTTTGGTGATTACACAGTCTTGGACACTACTTATCCAGGGATCCCATCATCTCCGCCGAATGGAACATCAACTGGGAGTGCTCCCCTTCCTAGTGGAAGTGCTGCAGATCTCCCATTCAGTGTCAACTTTAACGGCAGCAGCAAGAAGGATGAAATGACTCTTAGAATCATAATCACTATTGCTATATCTTTCATCTTACTCTTGCTGGGCATGGTTGGAGGAGCATTTTACATCATTTTTAAATGGAGGAAAGTCGGGAGACCATCAAGTGCGGCTGGTCTGCCATTCACATCGTCTCTAATCAATAGATCTGACATGGAGTCTACATTGTCTAGCAGAATGACAAGCTCGAGATCAATGTCCCATATGTCCACCATAGCTACTTCTGCTCTTTCTGTGAAAAGGTTTTCTCTTTCTGAGCTTACGAAAGCAACAGATACATTCAGTTCACAAAGAATATTGGGGGAAGGAGGATTTGGGCGCGTTTATGGTGGGAGATTGGATGATGGAACTGATGTTGCAGTTAAGGTACTAACGAAGGATTTTCATCAAAATGGAAACCGTGAATTTAATGTGGAAGTTGCGATACTATGCCGTTTGCATCATCGTAATCTTGTGAAACTAATCGGTATATGCACAGAAGGGCACAAACGATGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCTCATTTGCATGGTGTTGATCAGATAAATAACCCTCTGGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCTGCGAGAGGATTAGCCTATCTTCACGAGGATTCTAATCCTCATGTAATCCACCGAGACTTTAAAACTGGCAATGTGTTGTTAGAAGATGACTTCAACCCCAAGGTTTCTGATTTTGGATTGGCAAGAGAAGCAACTGAAGGAAGTCAATCTGCTCCTACAAGAGTCATGGGGACTTTTGGGTATGTCGCCCCAGAATATGCAATGACAGGAAATTTGCTTGTTAAAAGCGATGTTTACAGTTATGGTGTCGTGCTGCTCGAACTTCTAACAGGAAGAAAGCCAGTGGACATGTCTCAACCTGTTGGAGAGGAGAATCTCGTGGTATGGGCACGTCCATTGTTGAAAAGTAGAGAGGGTTTAAAACAGCTGGTGGATCCGACATTGGCTGGAACTTATGACTTTGATGAAATGGCAAAAGTTGCTGCCATTGCTTCAATGTGTGTAAGCCGGGAGGTCACTCAGAGACCCTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATACAACGACAACAACGAGATGGACGTGGATCACTTCAGTCCGAGGGAATCTTCTGGTCGAGGGTCTGATTTTAGAGTTGATCTTTCTGATAGCAGTTGGTGGTATGATGAGCCTGAAGATATTTCCGGTCGACTAACTTTTAGGCAAGCATTATCGCCGTCCTTCATCACAATGGATTACAGTTCCGGTCCACTTGATGAAATGGAAAACAGAATGTTTTCAGGTTCAAACTTGATGGAAAATGATCTGTCTTTGTTACCAACTCGACTCGGCAATAGATCAGGTCCCTTGAGAACTGCTAGAAGAAACAAGCTACCCTTTCATAGGCTTACTGGAAGTCAGAGTGATCATGCAGCATTTCCTTCCAAGCCTGTTTGGAATGGAGGTTACCGGCCTTGA 2037 0.4325 MHSLYKKQISAACGLSCEDPLTETPFGSPCGCVLPMSVLLLLDAAPLVVYPLINELEIELASGTYLKQSQVRIMGVIADNQNEGKTLVDVNLVPLGEKFDNITVVLISRRFWHKKVPLSKTLFGDYTVLDTTYPGIPSSPPNGTSTGSAPLPSGSAADLPFSVNFNGSSKKDEMTLRIIITIAISFILLLLGMVGGAFYIIFKWRKVGRPSSAAGLPFTSSLINRSDMESTLSSRMTSSRSMSHMSTIATSALSVKRFSLSELTKATDTFSSQRILGEGGFGRVYGGRLDDGTDVAVKVLTKDFHQNGNREFNVEVAILCRLHHRNLVKLIGICTEGHKRCLVYELVRNGSVESHLHGVDQINNPLDWEARKKIALGAARGLAYLHEDSNPHVIHRDFKTGNVLLEDDFNPKVSDFGLAREATEGSQSAPTRVMGTFGYVAPEYAMTGNLLVKSDVYSYGVVLLELLTGRKPVDMSQPVGEENLVVWARPLLKSREGLKQLVDPTLAGTYDFDEMAKVAAIASMCVSREVTQRPFMGEVVQALKLIYNDNNEMDVDHFSPRESSGRGSDFRVDLSDSSWWYDEPEDISGRLTFRQALSPSFITMDYSSGPLDEMENRMFSGSNLMENDLSLLPTRLGNRSGPLRTARRNKLPFHRLTGSQSDHAAFPSKPVWNGGYRP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1481 678 PANTHER OS01G0750732 PROTEIN 9 674 - -
Psa6g1481 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Psa6g1481 678 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 9 674 - -
Psa6g1481 678 Pfam Protein tyrosine and serine/threonine kinase 273 543 IPR001245 GO:0004672|GO:0006468
Psa6g1481 678 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Psa6g1481 678 SUPERFAMILY Protein kinase-like (PK-like) 254 548 IPR011009 -
Psa6g1481 678 ProSiteProfiles Protein kinase domain profile. 270 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1481 678 MobiDBLite consensus disorder prediction 659 678 - -
Psa6g1481 678 CDD STKc_IRAK 276 546 - -
Psa6g1481 678 Gene3D Phosphorylase Kinase; domain 1 241 346 - -
Psa6g1481 678 Gene3D Transferase(Phosphotransferase) domain 1 347 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1481 Psa-Chr6 71770418 71773882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1481 17 663 Receptor kinase-like Gene Family AT5G56890 49.556 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa6g1481 PK_Tyr_Ser-Thr 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1481 - - gmx:100815554 862.833