Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1449 ATGCAGTTGAAAAATCAGTTTTTCTTCTTCTTATTCATCTCTTGCATTTTCTGTTTCCATTCTAGCTTTTCTGCTGCAGAAAAGAATGAAGCATCTGCATTACTTTCTGTAAAAGCAGCTCTCATTGATCCATTGAATAGTTTACATGATTGGAAGGATGCAGGTGAAGCTCAAGCTCATTGTAACTGGACAGGTGTCGAATGCAACTCGCTCGGAGCTGTAGAGAAGCTTAATCTCTCACACATGAATCTTAGTGGAAGTGTTTCCAATGAGATACAAAGTTTGGAAAGTTTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTGTCAAAACACATAACCAATCTCACTTCATTAAAGAGTCTCGACGTAAGCCAGAATTTCTTCACCGGGGATTTTCCGTTAGGCCTTGGAAAGGCGTTGGGACTCGTTGCGTTGAATGCATCGAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATGTCTCTTCCTTAGAGATACTTGATTTTAGAGGAAGCTTTTTTGAAGGTTCTATTCCTAAGTCTATCTGTAACTTGAGTAAGTTGAAGTTCCTTGGTCTATCAGGAAATAACCTCACCGGGAAAATCCCGGTTGAGATTGGAAAACTTTCGTCGCTGGAGTCCATGATCATCGGTTATAACGAATTTGAAGGCGGTATTCCAAAAGAGTTTGGAAATTTAACTAAGCTGAAGTATCTTGATTTAGCAGAAGGCAATTTTAGTGGTGAAATTCCTGCTGAGTTGGGAAAGCTCAAGTTATTGAACACAGTTTTCTTATATAAGAACAGTTTTGAAGGTAAGATTCCACCAACTATTGGCAACATGACTTCATTGGTGCTGTTGGATCTCTCAGATAACATGTTATCCGGAAATATTCCGGCCGAGATTAGTCAGCTGAAGAATTTACAGCTTCTGAACTTCATGAGGAACAAGCTATCTGGTCCTGTACCTTCTGGTCTTGGAGATTTGGCTCAACTAGAAGTGCTTGAGCTATGGAACAATTCGTTCTCGGGGCCATTGCCTAGTGACCTTGGCAAGAATTCGCCATTGCAGTGGTTGGACGTATCGTCCAATTCACTCTCTGGCGAAATTCCAGAAACCCTTTGCTCTAAGGGAAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCAAGGGTCCACTTCCAACAAGCCTATCAAAATGTCCTTCGCTCGTTCGTGTTCGGATTCAAAACAACTTTCTTTCTGGTACAATCCCGGTTGGTTTTGGTAAGCTTGGGAAGCTTCAGAGACTAGAATTGGCTAACAATAGTCTCACCGGTGGAATTCCGGACGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCCAGAAACAACCTCAGCTCTTCCATTCCTTCGGCCGTTATTTCCATTCCAAATCTGCAGACGTTCATGGTCTCCAAAAACAACCTGGAAGGTGAGATTCCAGATCAATTCCAGGACTGTCCCTCACTCGGAGTCCTTGATCTCTCATCGAACTTTTTTTCTGGAACCATTCCAGAAAGCATTGCTTCATGTCAGAAACTGGTAAAGTTAAGCCTACAGAACAACCGATTGACCGGTGGCATCCCAGAAGCAATAGCAAGCATGCCTACATTGTCTATTCTTGATCTTGCTAACAACTCTCTAACTGGTCAAATACCCGATAGCTTTGGCGTATCTCCAGCTCTCGAAACATTCAATGTCTCATACAACAAGCTAGAAGGTCCTGTTCCAGAAAATGGCATGCTAAAAGCAATCAATCCAAATGATCTTGTGGGAAATGATGGCCTATGTGGTGGTCTCTTCCCTCCATGTGGAAAAACCTCGGCATACTCATTAAGGCACGGAAGCTCGCATGCAAAGCGCGTTATTGTAGGATGGATAGTTGGAGTATCATCAATCTTAGCCATTGGAGTTGCAGCTTTGGTAGCAAGATCTATATACATGAAGTGGTACACCGAAGGATTGTGCTTCCAAGGAAGATTCTATAGAGGTGGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAGAGACTTGATTTTACGAGTACCGATATCCTATCTTGCATCAAAGAAACAAACGTGATAGGCATGGGAGGAACCGGGGTTGTTTATAAGGCCGAGATACCACAATCAAGTACAGCTGTAGCTGTCAAAAAACTGTGGAGATCAGAAACCGATATTGAGGTAGGAAATAGCGACGATCTTGTTGGAGAGGTGAATCTTCTAGGGAGGTTAAGGCATAGAAACATTGTTAGACTACTAGGTTTTCTTTATAATGACACTGATTTGATGATAGTTTATGAATTTATGGTCAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAAGCTGCAAGGTTGCTTGTTGACTGGGTTTCTCGGTATAACATAGCTTTAGGAATCGCACAAGGACTCGCTTATCTTCATCATGACTGCCATCCACCTGTTATCCATCGAGACATCAAGTCGAACAACATACTGCTCGATGCAAATCTTGAGGCGAGAATAGCAGATTTCGGATTAGCCAAGATGATGATTCGGAAGAATGAAACAGTCTCCATGATTGCTGGATCCTACGGATACATTGCCCCTGAATATGGATACTCATTGAAGGTAGACGAAAAAATTGACATTTACAGCTTTGGAATAGTTCTGTTGGAGCTGATAACAGGAAAGCGGCCGATAGATCCGGAGTTTGGAGAATCTATAGACATTGTAGGGTGGATTAGAAGGAAATTAGACAAAAATTCTCCAGAAGAAGCGTTAGACCCAAGTGTAGGAAACTGTAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTCTGCACTGCTAAGCTACCTAAGGACAGACCCTCCATGAGAGATGTTATAATGATGCTAGGAGAGGCAAAGCCAAGGAGAAAAAGTGGTAAGAACAATGATACATTAACTGCTAACAAAGAGATGCCAGTAATTAGAACATCACCCGTTAATGACCTTCTGTAA 3045 0.419 MQLKNQFFFFLFISCIFCFHSSFSAAEKNEASALLSVKAALIDPLNSLHDWKDAGEAQAHCNWTGVECNSLGAVEKLNLSHMNLSGSVSNEIQSLESLTFLNLCCNGFESSLSKHITNLTSLKSLDVSQNFFTGDFPLGLGKALGLVALNASSNNFSGFLPEDLGNVSSLEILDFRGSFFEGSIPKSICNLSKLKFLGLSGNNLTGKIPVEIGKLSSLESMIIGYNEFEGGIPKEFGNLTKLKYLDLAEGNFSGEIPAELGKLKLLNTVFLYKNSFEGKIPPTIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLAQLEVLELWNNSFSGPLPSDLGKNSPLQWLDVSSNSLSGEIPETLCSKGNLTKLILFNNAFKGPLPTSLSKCPSLVRVRIQNNFLSGTIPVGFGKLGKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNNLSSSIPSAVISIPNLQTFMVSKNNLEGEIPDQFQDCPSLGVLDLSSNFFSGTIPESIASCQKLVKLSLQNNRLTGGIPEAIASMPTLSILDLANNSLTGQIPDSFGVSPALETFNVSYNKLEGPVPENGMLKAINPNDLVGNDGLCGGLFPPCGKTSAYSLRHGSSHAKRVIVGWIVGVSSILAIGVAALVARSIYMKWYTEGLCFQGRFYRGGKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGGTGVVYKAEIPQSSTAVAVKKLWRSETDIEVGNSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDLMIVYEFMVNGNLGDALHGKQAARLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPEFGESIDIVGWIRRKLDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSGKNNDTLTANKEMPVIRTSPVNDLL* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1449 1014 SUPERFAMILY Protein kinase-like (PK-like) 698 980 IPR011009 -
Psa6g1449 1014 Gene3D Ribonuclease Inhibitor 29 145 IPR032675 -
Psa6g1449 1014 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Psa6g1449 1014 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Psa6g1449 1014 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Psa6g1449 1014 SUPERFAMILY L domain-like 59 306 - -
Psa6g1449 1014 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Psa6g1449 1014 MobiDBLite consensus disorder prediction 983 1002 - -
Psa6g1449 1014 Gene3D Ribonuclease Inhibitor 234 330 IPR032675 -
Psa6g1449 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 996 - -
Psa6g1449 1014 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Psa6g1449 1014 SUPERFAMILY RNI-like 272 590 - -
Psa6g1449 1014 ProSiteProfiles Protein kinase domain profile. 705 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1449 1014 PANTHER UNNAMED PRODUCT 9 996 - -
Psa6g1449 1014 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Psa6g1449 1014 Gene3D Ribonuclease Inhibitor 146 233 IPR032675 -
Psa6g1449 1014 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1449 1014 Gene3D Ribonuclease Inhibitor 331 627 IPR032675 -
Psa6g1449 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Psa6g1449 1014 SMART serkin_6 705 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1449 1014 SMART LRR_typ_2 191 215 IPR003591 -
Psa6g1449 1014 SMART LRR_typ_2 335 359 IPR003591 -
Psa6g1449 1014 SMART LRR_typ_2 551 575 IPR003591 -
Psa6g1449 1014 SMART LRR_typ_2 119 143 IPR003591 -
Psa6g1449 1014 SMART LRR_typ_2 431 455 IPR003591 -
Psa6g1449 1014 SMART LRR_typ_2 287 311 IPR003591 -
Psa6g1449 1014 Gene3D Transferase(Phosphotransferase) domain 1 790 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1449 Psa-Chr6 70070482 70073664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1449 1 1014 Receptor kinase-like Gene Family AT1G08590 60.423 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g1449 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1449 - - gmx:100788430 1681.77