Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1429 ATGGAGAGGTTGCAAAAATGGAAGGCGGCTCTTAACCAAGCATCTAATTACTCCGGCTACAGTTTTCATATTGGGAATGAATATGAATACAATTTAATTGGGGAGATAGTAAAAAAAGTTACCAACAAGATTAATCGTGTTCCTTTGCATGTTGCAAATTATCCGAGATACCCTTCACGGTATATACCATCTAACTTTTGTCCTAAGAAACTGGCCATATGTAAGTTACCCAATAATTGCTTTACTTCATTGGAATTGGCTAGCTTTTTGAACCAGAAGTTAACAAATCTCAAAGTTTTAGACTTCAAAGATTCTGAATATTTAACGCATATACCTGATGTATCGGGTTTATCCAACTTAGAAGAATTTTCGATGAATAATTGTAAGAATTTACTTACAATCCACAATTCTGTTGGGCACTTGAATAAACTCAAAGACTTGAATGCTAAGGGTTGCAGCAAGGTCCAGAGTTTTCCACCCTTGAAGTTGACCTCTCTTAAAAAATTGCAACTTTCAGGTTGTGAGAGTCTTAACAGTTTCCCAGAAATATTAGGAGAGATGCAATACATTACGGTCATTGAATTGCGTGAAACTTCCATTGAAGAATTTCCACTTTCATTTCAAAATCTCACTGGCCTTTGCCTTTTAAAAGTAGTTGGAAATGGAATGCATAGGTTTTCGAGTAACAGTCTTATGATGACAAATTTGTGGAGTGTTCATATTGAAAATTGTCATCTATTATTTCCAAAAGAAAATGATAAATTCAGTTCTGAGATGTTTCCAGAAGTGGGATCTCTAGAGCTCTTTAACTCCAACCTGTCAGATGAATCTCTTCCAAAATTTCTTACTCTATTTGCTAATGTGACAATATTAGACCTATCGGCGAATCATTTCACAATTCTTCCTGAATGCCTCAAAGAATGTGACTTTTTATATAAGCTTTGTTTAGATGATTGCAAGAATCTCCAGGAAATTAGAGGAATCCCGCCAAGTTTAAAATATTTCTCTGCAAAATCTTGCGTTTCTTTGACATCATCGTCTAGAAGAATGCTACTGAATCAGGAATTGCATGAGGCTAGAGGCACCCACTTCTATTTTTCTGCAGGAACTGAGGGGATTCCAGAGTGGTTTGAGCACCAGACTAATGGACCTTCAATTTCTTTTTGGTCTCGTAACTACCTCCCTTCAATTGCTCTCTTACTTGTTACTAAGTTGAAGCATGGAGTTGACGCATCCGACTGCTTAGTAAATATCAATTTGTTCATCAATGGCTATGGATATTATGTTGACTCTCGCGAAGTTCGTGAATGGCAAGAGATTAAACCGGGTCATGCTTATCTATTTGATCTGCACCTGCATAGTCGGGTACTCAACTTTAACATCGAACATAGAAATGAGAAACTCTGGAACGTGAAATTCAAACTAGAGGAAGCACTTTCAAAAAATGAGTGGATCCATGTAGAGGTTACATACACCCATCAGATGAAGGATGCATTGCTTATAGAAAGTGGAATCCACATATTCAAAGAGAAAAATAGCATGGAGAATATTCGGTTTAGCAATCCTTATAAAAAGAGTAGATTTGTGGATGCAGAGACTGATATGGAGTTGGAAATTTAG 1620 0.3667 MERLQKWKAALNQASNYSGYSFHIGNEYEYNLIGEIVKKVTNKINRVPLHVANYPRYPSRYIPSNFCPKKLAICKLPNNCFTSLELASFLNQKLTNLKVLDFKDSEYLTHIPDVSGLSNLEEFSMNNCKNLLTIHNSVGHLNKLKDLNAKGCSKVQSFPPLKLTSLKKLQLSGCESLNSFPEILGEMQYITVIELRETSIEEFPLSFQNLTGLCLLKVVGNGMHRFSSNSLMMTNLWSVHIENCHLLFPKENDKFSSEMFPEVGSLELFNSNLSDESLPKFLTLFANVTILDLSANHFTILPECLKECDFLYKLCLDDCKNLQEIRGIPPSLKYFSAKSCVSLTSSSRRMLLNQELHEARGTHFYFSAGTEGIPEWFEHQTNGPSISFWSRNYLPSIALLLVTKLKHGVDASDCLVNINLFINGYGYYVDSREVREWQEIKPGHAYLFDLHLHSRVLNFNIEHRNEKLWNVKFKLEEALSKNEWIHVEVTYTHQMKDALLIESGIHIFKEKNSMENIRFSNPYKKSRFVDAETDMELEI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1429 539 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 407 IPR044974 GO:0006952
Psa6g1429 539 SUPERFAMILY L domain-like 53 378 - -
Psa6g1429 539 PANTHER NB-ARC DOMAIN PROTEIN 69 407 - -
Psa6g1429 539 Gene3D Ribonuclease Inhibitor 180 358 IPR032675 -
Psa6g1429 539 Gene3D - 1 52 IPR035897 -
Psa6g1429 539 Gene3D Ribonuclease Inhibitor 65 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1429 Psa-Chr6 69360888 69364416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1429 49 210 WRKY Transcription Factor Family AT4G12020 36.310 2.34e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1429 - - mtr:MTR_6g075690 396.356